Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03662 ATGGGAAGCATGAAGGTGCATCAGTTCACACGTGGATTTTGGGAGCACGAACCCTCCCTCTCACTTGGGTGCAAGCGGTTACGCCCTCTCGCCCCCAAACTTTCTAATGACACCACCGAAATTACCACTACTTCACCCACTCGTACTACTACTACACCTTTCGACCTCAAAAGCTTCATTCGACCCGAAAGTGGCTCCAGACAAAAACTTGCATCCCCTGACGATAATAAGAAAGATCCACCTTCACCGCACAGCCAGGTGGAAACGCATCCAGGGGGGACACGGTGGAATCCGACGCAAGAGCAGATAGGGATATTGGAGATGCTGTATAGAGGTGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACGGTTCAACTTGGCAAGTATGGCAAAATTGAAGGGAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAATAGTCTTGGCCTTGCTCATAGTCCTCGAACTCCCACCACAGTCTCATCCACTTTTGCTAGTACTATAACAACTTTGGAGACCCCCAAAAAGGGAGAAGTAGTTGAAAGGGATCAGGAAGATAGCCCATTCAAGAAGTGTAGGAGCTGGGCGTTTGAGTATTTGGAAGACCAAAGTTGGTCATTGTGCAAAGAAGAAGAACAAAAAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 717 0.4812 MGSMKVHQFTRGFWEHEPSLSLGCKRLRPLAPKLSNDTTEITTTSPTRTTTTPFDLKSFIRPESGSRQKLASPDDNKKDPPSPHSQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPTTVSSTFASTITTLETPKKGEVVERDQEDSPFKKCRSWAFEYLEDQSWSLCKEEEQKTLELFPLHPEGR. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03662 238 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 238 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Seca8g03662 238 SUPERFAMILY Homeodomain-like 90 159 IPR009057 -
Seca8g03662 238 Pfam Homeodomain 94 153 IPR001356 GO:0003677
Seca8g03662 238 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Seca8g03662 238 SMART HOX_1 91 158 IPR001356 GO:0003677
Seca8g03662 238 MobiDBLite consensus disorder prediction 35 57 - -
Seca8g03662 238 MobiDBLite consensus disorder prediction 159 174 - -
Seca8g03662 238 MobiDBLite consensus disorder prediction 153 174 - -
Seca8g03662 238 MobiDBLite consensus disorder prediction 31 99 - -
Seca8g03662 238 MobiDBLite consensus disorder prediction 68 84 - -
Seca8g03662 238 FunFam WUSCHEL-related homeobox 4 93 160 - -
Seca8g03662 238 CDD homeodomain 94 155 IPR001356 GO:0003677
Seca8g03662 238 Gene3D - 94 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03662 Seca-Chr8 105699849 105701672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03662 4 181 Wox Gene Family AT1G46480 61.957 2.89e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Seca8g03662 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03662 - - aprc:113848075 376.711