Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03652 ATGACGGAAGCAGGGGAAGATTGTTGCGTGAAGGTTGCGGTCCATGTGCGACCGCTAATCCACGATGAGAAGGTTCAAGGTTGCAAAGATTGTGTAACCGTCGTTCCCGGGAAGCCTCAGGTACAAATTGGTTCCCATTCCTTTACATTTGATCATGTTTATGGTAGCACTGGTTCTCCCTCCTCTGCTATGTTCGATGAATGTGTTGCTTCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACTGGCTTTAAAGACGGTTGCCAAGCAGGAATTATACCCCAAGTTATGAGTCTCTTGTTTAACAAAATTGAGACCTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCATTTATCGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGACCCATCCTCTATGAACAAACCAGATACTGCAAATGGACATGCTGGGAAAGTGACTATTCCTGGGAAACCACCAATACAAATTCGTGAGACGTCAAACGGTGTCATTACCCTAGCAGGATCTACTGAAGTCAGTGTTACAACACTAAAAGAAATGGCTGCTTGCCTAGAACAAGGATCATTGAGTAGAGCAACAGGGAGCACAAATATGAACAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAAATGCGGAAGCTCGGTAGTCCTAGTGAGATCAGTTCAAATGAGACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCGGAACGAGCAAAAAGAACGGGGTCCGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGCAATGTGATTAGTGCACTGGGTGATGAAAAGAAGAGAAAAGAAGGTGTCCATGTTCCTTATAGGGATAGTAAACTTACTCGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTGTCAATAGAGATCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTAGAGTATTTACAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATATCTTGGCTAGAAGCTGCCAATGAGGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGCTCTGTTGAAGTACAAAGTGAAAAGGATGCTTATGATGGTAGCACATACAATGTAAAGACTGATGGGCTTAAAAGGGGCTTACCTATCACATCCTCTGATTATCCAATGAGTGAATCAACAGGGTTGCAATTACCAACTTTAGCAGGGGATTCAAGAGAAATTGAAGAAGTAGCAAAAGAATGGGAGCATACACTTCTGCAAAATAGTATGGATAGAGAGTTAAATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAGTGGCTGATGCTGAAACACTCAAGCAGCACTTTGGAAGGAAGATAATGGAACTTGAGGATGAGAAGAGAGCTGTCCAGCAAGAGAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAGTTCTGATGGACAAACACAGAAATCAGAGGATATTCATGCCCAAAAATTGAAAGCACTGGAAGGCCAGATTCTGGATCTGAAGAAGAAACAGGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGCGTCTGCAAGATGAAATACAATCTATAAAATCCCAAAAGGTCCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAATTAAGGAAGGAAGGAAGAAGAAATGAGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAACAGAGACACTACAGTTACAATGAATGGAAGTGGAACAAATGGACAGGTAATGAACTTTCCTTCCTCTTCTTAG 2187 0.4262 MTEAGEDCCVKVAVHVRPLIHDEKVQGCKDCVTVVPGKPQVQIGSHSFTFDHVYGSTGSPSSAMFDECVASLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQAGIIPQVMSLLFNKIETLKHQIEFQLHVSFIEILKEEVRDLLDPSSMNKPDTANGHAGKVTIPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLGSPSEISSNETMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERISWLEAANEDLCRELHEYRSRCSVEVQSEKDAYDGSTYNVKTDGLKRGLPITSSDYPMSESTGLQLPTLAGDSREIEEVAKEWEHTLLQNSMDRELNELNKRLEQKESEMKLFGVADAETLKQHFGRKIMELEDEKRAVQQERDRLLAEVENLAASSDGQTQKSEDIHAQKLKALEGQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKSQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSNRDTTVTMNGSGTNGQVMNFPSSS. 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03652 728 Gene3D Kinesin motor domain 2 392 IPR036961 -
Seca8g03652 728 Coils Coil 680 700 - -
Seca8g03652 728 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 4 717 IPR027640 GO:0003777|GO:0007018
Seca8g03652 728 Coils Coil 499 566 - -
Seca8g03652 728 MobiDBLite consensus disorder prediction 154 175 - -
Seca8g03652 728 MobiDBLite consensus disorder prediction 702 728 - -
Seca8g03652 728 CDD KISc_KIF4 8 365 - -
Seca8g03652 728 Coils Coil 599 647 - -
Seca8g03652 728 FunFam kinesin-like protein KIN-4A isoform X1 3 392 - -
Seca8g03652 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 395 IPR027417 -
Seca8g03652 728 ProSitePatterns Kinesin motor domain signature. 259 270 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca8g03652 728 MobiDBLite consensus disorder prediction 704 728 - -
Seca8g03652 728 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 PRINTS Kinesin heavy chain signature 314 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 PRINTS Kinesin heavy chain signature 260 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 ProSiteProfiles Kinesin motor domain profile. 9 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 Pfam Kinesin motor domain 17 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 SMART kinesin_4 7 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca8g03652 728 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03652 Seca-Chr8 105204826 105217018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03652 10 410 Calmodulin-binding Proteins AT5G65930 32.346 9.62e-55 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03652 - - gmx:100789048 1277.31