Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03645 ATGGAAACTGGATTACCTTTGCTTCACTGTCTCTTGCAGCATTCTCTGAGAAGCCTATGCTCATCTCCAAATTCCTCAAGTTCTTCCAAATGGGTCTACGCGGTCTTCTGGAGAATAGTACCACGCAATTTTCCTCCACCAAGGTGGGAATTTGGAGGGACTGCTCTTGATCGCACTAAGGGAAATAATAGAAATTGGATCCTTGTTTGGGAAGATGGATTCTGCGATTTTAATGAATGCGAACAAAGGAGGAATGGATACTTGAATGACAGGTTTGGAGCTGACGTATTCTTCAAAATGTCTCATGAGGTTTACAGTTATGGAGAAGGACTAGTAGGGAAAGTGGCTGCAGATAATAGTCACAGATGGGTTTACAGTGACACTCAAAATGGGTGTGAACCTAGCTACATTGGTTCATGGAATGCTTCAATTGATCATCAACCAAGAGCATGGGAGTTTCAGTTAAATTCAGGTATTCAGGTTAGTAAATTCATTCAAAAAATAAATAAAAAAAAGCTTCAGAAACATGTTGTGTAA 537 0.4004 METGLPLLHCLLQHSLRSLCSSPNSSSSSKWVYAVFWRIVPRNFPPPRWEFGGTALDRTKGNNRNWILVWEDGFCDFNECEQRRNGYLNDRFGADVFFKMSHEVYSYGEGLVGKVAADNSHRWVYSDTQNGCEPSYIGSWNASIDHQPRAWEFQLNSGIQVSKFIQKINKKKLQKHVV. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03645 178 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 161 - -
Seca8g03645 178 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 135 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03645 Seca-Chr8 105005977 105008339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03645 13 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 27.517 5.73e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03645 - - gmx:100807289 282.722