Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03637 ATGGCACACCCAAAATCCCTTTTCGATTCCCTTTACTGTTCAGAAGATCATTGGGAGGAACAAGCAGCAGAAGAAGAAGAAGAAGAAAATGATTACACCAATTACTCAACTAGCACACCAACAAACTCTCCTCTTGTTTTGCTAGAACAGGACTTGTTCTGGGATGATGAAGAGTTAACATCTCTTCTCTCCAAAGAACACCACAACCAACTCTTCTCTTGCCTAAAAAACAACCCTTCCTTGGATTCATCTCGCAGAGAAGCTGTGGAGTGGATGCTGAAAGTGAATGCCCATTTCTCCTTCTCTCCTCTCACTGCTGTTCTTGCTGTCAACTACTTAGACAGGTTCCTTTTCAGCTTCAGATTTCAAAATGGGAAGCCTTGGCTCACACAACTAGCATCTGTGGCTTGCCTCTCCCTTGCTGCTAAAATGGAAGAGACCCAAGTGCCTCTTTCTATAGACCTCCAAGTGGTGGACAGTAGATACTTGTTTGAAGCTAAAACCATTAAGAGAATGGAAATTTTGGTCCTTTCGACACTTGGATGGAAGATGAACCCTGTAACACCTCTTTCATTTCTTGATTACATCACAAGGAGACTTGGGTTAAAGGGTTATCTCTGTTGGGAGTTTCTCAGGAGATGTGAAGCGGTTCTGCTCTCTGTCTTTGCAGATTCCAGGTTTATGTGCTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCACGTTGTCACTAGTGTGGAGCCTAGTCTAGGAGTTGAATACCAAAATCAGCTCTTGGGTATTCTTGGATTCAACAAGGACAAGGTGGAAGAGTGCTATAAGCTCATGTTGGAGGTAGTATCAGGGTATGATCACAAAGGGAAACAATCTAAGTTGAACAACAAACGCAAGTTTATTGGGTCAGGGTCGTTTCTTGGTAGCCCAAATGGTGTAATGGATGGATCATTTAGCTGTGATAGCTCAAATGATGAATCTTGGGAGTTAGGTGCATTAGTTCCATCCTCACCAGAGCCTTTGTCCAAGAAGAATAGGACTCAAGATCAGCTTCTATTGAACCATTCAAACAAAGAATTTCTCAGCATTCCTCGCTAG 1095 0.4292 MAHPKSLFDSLYCSEDHWEEQAAEEEEEENDYTNYSTSTPTNSPLVLLEQDLFWDDEELTSLLSKEHHNQLFSCLKNNPSLDSSRREAVEWMLKVNAHFSFSPLTAVLAVNYLDRFLFSFRFQNGKPWLTQLASVACLSLAAKMEETQVPLSIDLQVVDSRYLFEAKTIKRMEILVLSTLGWKMNPVTPLSFLDYITRRLGLKGYLCWEFLRRCEAVLLSVFADSRFMCYLPSVLATATMMHVVTSVEPSLGVEYQNQLLGILGFNKDKVEECYKLMLEVVSGYDHKGKQSKLNNKRKFIGSGSFLGSPNGVMDGSFSCDSSNDESWELGALVPSSPEPLSKKNRTQDQLLLNHSNKEFLSIPR. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03637 364 Gene3D - 186 275 - -
Seca8g03637 364 PANTHER CYCLINS 59 281 IPR039361 -
Seca8g03637 364 CDD CYCLIN_AtCycD-like_rpt2 187 277 - -
Seca8g03637 364 Gene3D - 69 185 - -
Seca8g03637 364 Pfam Cyclin, N-terminal domain 65 185 IPR006671 -
Seca8g03637 364 MobiDBLite consensus disorder prediction 19 41 - -
Seca8g03637 364 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Seca8g03637 364 SMART Cyclin_C_2 187 321 IPR004367 -
Seca8g03637 364 CDD CYCLIN_AtCycD-like_rpt1 85 182 - -
Seca8g03637 364 SUPERFAMILY Cyclin-like 53 185 IPR036915 -
Seca8g03637 364 FunFam D6-type cyclin 68 185 - -
Seca8g03637 364 FunFam CYCLIN D32 186 275 - -
Seca8g03637 364 SMART cyclin_7 90 178 IPR013763 -
Seca8g03637 364 Pfam Cyclin, C-terminal domain 187 296 IPR004367 -
Seca8g03637 364 SUPERFAMILY Cyclin-like 188 287 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03637 Seca-Chr8 104815161 104816605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03637 7 298 Core Cell Cycle Gene Families AT4G34160 52.397 7.02e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03637 K14505 - aprc:113874132 538.88