Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03621 ATGAAAATGGGTTTTAGTGTAAGAAGAGGGAGGAAGTTGTATTATGATATTGAGAAACAGGACATTCGTTTGAAGGATTTTTATTGCTCCAAAGAAGGGTTTAAGAACAATGAACCTGTAGGTGAATTGACTCATGAAAGAACAAATTCAAAAGCATATTGCAAAGCTATAATGAGATTTAATGTGAGAAATGATGGGAGTTATTTGGGGAGTGGGTTTGATAATCTTGGTATGACGATGAAAGATATGCATAATATTGTCTCCTATGAAAAGTTAAAATTAATTGATGTTGGGGATGCTCAGGCTTTGGTGAATCACTTACATAGTAGACAAGCACAAGATGCAATGTTCTACTATAATGTGCAGTTAGACAAGACATCACGTCTAGCTAATGTATTTTGGAGCGATGGTAAATCTGAAATTGATTATGATTGCTTTGGGGATGTTGTGGTTTTTGACACCACTTATTATACTAATAAATATAACTTGATTTGTGCTCCCTTTGTTGGTGTAAATCATCATTGGAAAAATATTATGTTTGGTTGTGCCTTGTTATTTGATGAAATTGCAGTCTCTTTTACTTGGTTGTTCAAAGTGTTTTTGGAAAGTATGGGAAACCAACAACCAAAAGCAATTTTTATAGATAAAGGTGCAACTATGTCCAAAAATCAATTATGTTACTGA 684 0.3333 MKMGFSVRRGRKLYYDIEKQDIRLKDFYCSKEGFKNNEPVGELTHERTNSKAYCKAIMRFNVRNDGSYLGSGFDNLGMTMKDMHNIVSYEKLKLIDVGDAQALVNHLHSRQAQDAMFYYNVQLDKTSRLANVFWSDGKSEIDYDCFGDVVVFDTTYYTNKYNLICAPFVGVNHHWKNIMFGCALLFDEIAVSFTWLFKVFLESMGNQQPKAIFIDKGATMSKNQLCY. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03621 227 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 221 IPR031052 GO:0006355
Seca8g03621 227 Pfam MULE transposase domain 149 221 IPR018289 -
Seca8g03621 227 Pfam FAR1 DNA-binding domain 2 69 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03621 Seca-Chr8 104064957 104065795 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03621 MULE 4.4e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03621 - - tpra:123905334 313.538