Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03587 ATGAGAACCCAACGACCTCTTCATCTCTTCCTATCCTTCCTCTTCCTCGCAACCGCATTCTCCACTTTCCATCCGACGGCCACCGCCGTAGACGAAGGTCCGGTCACCGGCGGCGACGAGGACACCGAATTCATCCGCACAAGTTGCAACACCACGCTGTACCCTGACGTCTGCTACACCTCCCTCTTTCGCTACGCCAATGCGGTCCAACAGAACCCTGGCCAGCTGGCTCGTGTCGCCATATCCGTGAGCCTCTCGAAGGTCCACCGCACCGCCTCCTACATCTCCAACCTCACTCGCGAAACCGACTACGGCGGCAACTCGCGCGCTACTCAGGCACTCCACGACTGCTTCTCCAACCTCGGCGACGCCGTCGACGAAATCCGTGGCTCGCTCAAGCAGATGCGCCAGATAGGAGCCGCCGGAGCCGGAGCCAGCTCGTTCCTGTTCCAGATGAGCAACGTGCAGACGTGGATGAGTGCGGCGCTTACCGACGAGGAGACTTGTACGGACGGATTCCAAGACGTACCGGACTGTCCGACGAAAGCGGATATATGCGATCGGGTCACGCACGTGAAGAAGTTCACGAGCAATGCTTTGGCGCTCGTGAACAGCTACGCCAACAAGGGAATGCCTTGA 639 0.5947 MRTQRPLHLFLSFLFLATAFSTFHPTATAVDEGPVTGGDEDTEFIRTSCNTTLYPDVCYTSLFRYANAVQQNPGQLARVAISVSLSKVHRTASYISNLTRETDYGGNSRATQALHDCFSNLGDAVDEIRGSLKQMRQIGAAGAGASSFLFQMSNVQTWMSAALTDEETCTDGFQDVPDCPTKADICDRVTHVKKFTSNALALVNSYANKGMP. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03587 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 206 IPR035513 -
Seca8g03587 212 Pfam Plant invertase/pectin methylesterase inhibitor 44 202 IPR006501 GO:0004857
Seca8g03587 212 CDD PMEI-like_3 47 208 - -
Seca8g03587 212 NCBIfam pectinesterase inhibitor domain 13 206 IPR006501 GO:0004857
Seca8g03587 212 FunFam Pectin methylesterase inhibitor 1 40 206 - -
Seca8g03587 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 202 - -
Seca8g03587 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Seca8g03587 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03587 Seca-Chr8 103116046 103116684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03587 45 205 Carbohydrate Esterase AT3G14310 22.840 4.73e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03587 - - gmx:100812251 333.954