Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03586 ATGGCTTCTACTTCTAAGAATAGCGAAGACCCTCGAATAGCAAGAATATCCTCTGCAATCCGAATCATCCCCAACTTTCCTAAGCAAGGTGTTAGGTTTCCAGATGTAACCACATTGTTTCTTGATACAAAAGCTTTCAAAGATGCAATTGACTTGTTTGTGGAGAGGTACAGAGATCAAAATATTTCTATTGTGGCAGGCATGGAAGCAAGAGGCTTCATATTTGGCTCACCTATTGCATTAGGTATTGGAGCAAAATTTGTCCCCATGAGGAAACACAATAAATTGCCTGAGGAAGTTATCTCTGAGAAGCATTCTTTGAATTATGGAACTGACAAAATGGTAATGCGTGTAGGGGCTGTACAACCAGGAGAACGAGCCATAGTCATAGATGACCTTATTGTCACTGGGGAAACTTTATATGCTGCAGCTAAGCTTCTAGAACGTGCTGGGGTACATGTAGTTGAGTGTGCTTGTGTAATTGAATCACCAGAGTTGAAGGTATGGCCTTATAAATTAATTTGTTCAGCTTAG 534 0.4045 MASTSKNSEDPRIARISSAIRIIPNFPKQGVRFPDVTTLFLDTKAFKDAIDLFVERYRDQNISIVAGMEARGFIFGSPIALGIGAKFVPMRKHNKLPEEVISEKHSLNYGTDKMVMRVGAVQPGERAIVIDDLIVTGETLYAAAKLLERAGVHVVECACVIESPELKVWPYKLICSA. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03586 177 FunFam Adenine phosphoribosyltransferase 1 4 173 - -
Seca8g03586 177 Gene3D - 3 173 IPR029057 -
Seca8g03586 177 Pfam Phosphoribosyl transferase domain 42 166 IPR000836 -
Seca8g03586 177 SUPERFAMILY PRTase-like 18 165 IPR029057 -
Seca8g03586 177 CDD PRTases_typeI 49 167 IPR000836 -
Seca8g03586 177 Hamap Adenine phosphoribosyltransferase [apt]. 16 177 IPR005764 GO:0003999|GO:0005737|GO:0006168
Seca8g03586 177 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 7 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03586 Seca-Chr8 103057728 103061708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03586 5 167 PRT Gene Family AT1G27450 69.939 8.84e-83 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03586 K00759 - gmx:100777103 247.669