Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03584 ATGCTATGTGAACATCTATATCCACTCATGGACCATCTTACACCAAACTATAAGACAACAAAGGTGATAAGAATGTTGCTCGAAATGGACCAGTCAAAGGTAATCCATCTGATTGAATCTCCTGAGGACTTGAAGATGAAGGTGTCTGAGAAAATGCAAGTCCTTCATGAAGCTGCATCAGGTTCTGAAGCTGGCGATCAGCTTGGCTCATTGTCATTGAATGAATGA 228 0.4123 MLCEHLYPLMDHLTPNYKTTKVIRMLLEMDQSKVIHLIESPEDLKMKVSEKMQVLHEAASGSEAGDQLGSLSLNE. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03584 75 SMART poly_2 1 58 IPR002004 GO:0003723
Seca8g03584 75 SUPERFAMILY PABC (PABP) domain 1 66 IPR036053 GO:0003723
Seca8g03584 75 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 60 IPR002004 GO:0003723
Seca8g03584 75 Pfam Poly-adenylate binding protein, unique domain 1 55 IPR002004 GO:0003723
Seca8g03584 75 Gene3D - 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03584 Seca-Chr8 103006038 103006265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03584 1 75 Eukaryotic Initiation Factors Gene Family AT1G49760 54.545 3.81e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03584 K13126 - gmx:100783163 106.686