Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03544 ATGCAGACATCCTACAACGAGCCACGCCTTCTCATTCTAACTGATCCAAGAACAGGTCATCAAGTTATTACCTCTTCACAAACCAACTATTGCTTTTGTGACACTGATTCTCCAATGCGATATGTTGATGTTGGGATTCTTGCTAATAACAAGGGAAAACATAGCATTGGTTGTCTCTTTTGGCTATTAGCAAGGATGGTATTGCAGATGTGA 213 0.4038 MQTSYNEPRLLILTDPRTGHQVITSSQTNYCFCDTDSPMRYVDVGILANNKGKHSIGCLFWLLARMVLQM. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03544 70 Gene3D - 1 70 - -
Seca8g03544 70 PANTHER 40S RIBOSOMAL PROTEIN SA 1 70 IPR005707 GO:0003735|GO:0006412|GO:0015935
Seca8g03544 70 SUPERFAMILY Ribosomal protein S2 2 69 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03544 Seca-Chr8 102186507 102186909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03544 1 70 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 74.324 1.83e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03544 K02998 - ncol:116246474 116.316