Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03453 ATGGAGAAGAAGCGAGGCGCACGAATTGAAGAAGGAACAGGGAGGCGCGCGAAGAAGCTACGTACACGATCGAAGAAGGAACAGCAAGAGCGAGACCGATCCTTGCCCCCGTCCTCCATAGTCAACCTGCAAGTTAAAGTAACAACCATCATTGCTTTCATATTTGCAACTGTTGGTGTGTTACTGATAACTCTAGAGCTCTTTCTTGTATGCTTCAAGCCTTCATGGGGAGAGTTCCAGAACAAGTTTCATGAGGGAGATGGTTACAAGTTCTTCCCATTTTCATTTGAATCACTTAATGATAGGATGTACTATAGTTTCCAATACTACATAGCAAGTATTAGAAACCATGTGAATTTTGCTTTGATAACCTGCTTACAATCCATTCTTTTCCTTTCTGTCACCACCTTAAGAGAAAAAAGGCCTATTTATTCTCCTATTTGCTACAAAACTGGTTTCCCAGTAACTGTCAGTGAAGTTGACGCATTATATGCACTTTTCAAGAGCATCAGCAGTTATGTTATTGATGATGGACTAGTAAGCAAGGTTGGTGATACTTCACAAAAGCGGAAGAAAGGCATACTTGGAGCTAAAGGTGGTGATAAAGAAGTAAGATCATTGCTTTGA 627 0.4083 MEKKRGARIEEGTGRRAKKLRTRSKKEQQERDRSLPPSSIVNLQVKVTTIIAFIFATVGVLLITLELFLVCFKPSWGEFQNKFHEGDGYKFFPFSFESLNDRMYYSFQYYIASIRNHVNFALITCLQSILFLSVTTLREKRPIYSPICYKTGFPVTVSEVDALYALFKSISSYVIDDGLVSKVGDTSQKRKKGILGAKGGDKEVRSLL. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03453 208 MobiDBLite consensus disorder prediction 1 33 - -
Seca8g03453 208 Pfam V-type ATPase 116kDa subunit family 39 96 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03453 Seca-Chr8 99027600 99030654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03453 42 96 Primary Pumps ATPases(2) AT2G21410 56.140 1.13e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03453 K02154 - cpap:110808184 76.6405