Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03444 ATGTCGAAAGGAAGATCACACTCAACCTCATCCTCATCCTCACTCTGCTGTTACAACCACTTGGTGTTGGTGCCTGTTGTGCTCGTTCTCTTCCACTCTCTCATTCTGCTACCTTCTTCTTCGCTTGCTATCCGACCCGTAGATTCGGATCGGGTTGAACTCGTCAACGCGACCGAGTCCAATGTCTCTCTGTCGAGGCCCAGCTTTGCCGACATGATTGATCGAGCTCTGGAGCATGAGTTCACTGAGAACGATCAAAATGAAGCAGCTGATCCTGGAAGCTTCAACAACAGTGTTGCAGAGCAACAGGCTGTTCTAGAGACTGTGGCCAGAGTCACGCCAAACAAGAATGACACAAAAGATGAAAAGTCATTTCCACTCCATCATGTATTCAATAGAGGTGAGGATACCCCAATGTTGATAGATCGAAAGGACAATGTCTTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTGCAGCTAGATTTACGATTAATTTCAGACTTGGTTGTTGCTATTGTTTCGGCAACTTGCGGTGGCGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGTGGCTTTAACTTCATCAGCGAAATGGTGCAGGTGGAAACAGTGGCTCAATTTGGTGTAATCTTTCTTCTATTTGCATTGGGCCTGGAGTTCTCCACGACAAAGCTTCGAGTTGTTAGATCTGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGACTTACTGTGTCGTTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTCTCCATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAAGTAACAATTGGGACCCTTATTTTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCATTGCTTCCAGTTCTGGGTGGCACCTCAGGCGTTTTTCAAGGAGTGTTATCAATGACAAAGCTGTTGGTGACATTGATTGCATTCCTCTCTGTTCTTTCAATATTGTCTCGCACTTGCCTTCCGTGGTTGCTTAAACTGATGATAAGCCTATCATCACAGGTTCATATCATTATCCCACTTTAA 1158 0.4456 MSKGRSHSTSSSSSLCCYNHLVLVPVVLVLFHSLILLPSSSLAIRPVDSDRVELVNATESNVSLSRPSFADMIDRALEHEFTENDQNEAADPGSFNNSVAEQQAVLETVARVTPNKNDTKDEKSFPLHHVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRSVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLSILSRTCLPWLLKLMISLSSQVHIIIPL. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03444 385 Pfam Sodium/hydrogen exchanger family 171 376 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g03444 385 Gene3D - 164 384 IPR038770 -
Seca8g03444 385 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 27 379 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03444 Seca-Chr8 98853923 98869597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03444 68 380 Antiporters AT5G11800 82.132 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03444 K26735 - gmx:100811030 634.024