Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03426 ATGAGAATCAATAGTAACGTGGAAGAGTCACAACAGATGGATGCAGAGAATGATTTGTTGCAAGGTTTGGATGATATGACCATTACTGATGAAGAAGTTGAAGAAAGTAGTGATGAGGAGAACAATGATCCTTGTGGTGAAACAGATGGTGAATATAGTGGTGATGGAATGGAACGTGCTAATATGGAAGAAGTTATCAATACAGATAATTTGCAGGATATTCGAAATTTGAATATGAAGAATATTAGCCCCGAATATGTAAAGCGGTGTGTTTTTGCTAACATGGGCCTTGCATATAAGTTTTATTCTAAATATGCAAAAGTGAACGGATTTTCTGTGAGGAAAAGCAAGGTGATTAAAAACTCTACGAAGGATATTGTGCAGAAAACTTTACTTTGTCACAGGGAAGGGGAAAGGGATAAAAAGAGGCAAAGCAATAAACCTAAGTGTGAAGCAAAACGTGAAACAAGGTGTGGTTGTAAGGCAAGACTTCGAGTCCATGTTGACATCAATTCTGGTCGTTGGTATGTGACAACTTTTGATCATTTACACAACCATGAGATGCTAGTGGAAAGGCTTTGTGCCATGTTGCCAGCCCATAGGAAAATGAGTCCAACAGATATAATGGAAATGAACAGCTTGAGAAATGTTGGGATAAGCACACCTGATATATATGCTGCATTTGCAAGTCAATCAGGGGGATACCATAAGATTGGATTTTGA 723 0.3817 MRINSNVEESQQMDAENDLLQGLDDMTITDEEVEESSDEENNDPCGETDGEYSGDGMERANMEEVINTDNLQDIRNLNMKNISPEYVKRCVFANMGLAYKFYSKYAKVNGFSVRKSKVIKNSTKDIVQKTLLCHREGERDKKRQSNKPKCEAKRETRCGCKARLRVHVDINSGRWYVTTFDHLHNHEMLVERLCAMLPAHRKMSPTDIMEMNSLRNVGISTPDIYAAFASQSGGYHKIGF. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03426 240 Pfam FAR1 DNA-binding domain 100 189 IPR004330 -
Seca8g03426 240 MobiDBLite consensus disorder prediction 25 46 - -
Seca8g03426 240 MobiDBLite consensus disorder prediction 1 55 - -
Seca8g03426 240 MobiDBLite consensus disorder prediction 1 17 - -
Seca8g03426 240 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03426 Seca-Chr8 98309898 98312906 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03426 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03426 - - tpra:123913749 193.356