Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03418 ATGAAACAGGATTGGCCAAATGAGAAGAAACAATTCAGTCCTGTATCAGTGCTAGATTTCCCATTTGAAGATAACGAAGAAATTAAGTCACATTTCAATTCCACGGCTCCTTCCTTCTTAGAAGATGGAACCGAACACCAGCATATCCCGAAGAGACAACACTTTAAAAGTGTAGCATCACTAGAGCCAGTTGCATTAGAGAAAAGGATCGCATTGTCAGAACAGAAAGATGAACAACACAACCATTCTACAAAACAATGTTCAGTATTAGCCAAAAATGGAAACAACAAATTTCATCATGACAAGATCGAGGAGAATGCGCGCAACCTTCTCAACTTGGTTAAAAGGTCACATCCATTCAACTGTTTGATAATTAAGGCAGAGAATCTACTGTTTGATTATTTCAAGCAGAGCATTGGGGAAAATAATGATATTGACCATTCAAAGAAGCTTCACCTTTGA 462 0.3788 MKQDWPNEKKQFSPVSVLDFPFEDNEEIKSHFNSTAPSFLEDGTEHQHIPKRQHFKSVASLEPVALEKRIALSEQKDEQHNHSTKQCSVLAKNGNNKFHHDKIEENARNLLNLVKRSHPFNCLIIKAENLLFDYFKQSIGENNDIDHSKKLHL. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03418 153 PANTHER OS04G0572500 PROTEIN 7 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03418 Seca-Chr8 98163332 98163918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03418 8 137 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 31.343 1.52e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03418 - - gmx:102668195 169.859