Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03416 ATGTGCCGGGACGAGTCAACGGCGTTCGTGCTGAAATTCGTGGCGATGGCGTCGATTTTGGTGGCGGGGTTTGGGGGAATCGCGATTCCGCTGTTGGGGAAACAGCGGCGGTTCCTGCGCAGCGATGGGATGGTGTTGGCGGCGGCGAAGGCGTTTGCGGCGGGGGTGATTTTAGCGACGGGGTTTGTTCACATGCTGAAGGACTCATGGGAGGCACTGAACCACCCTTGTCTACAATCGCACACGTGGTCCAAGTTTCCTTTCACCGGGTTCTTCGCTATGATGTCGGCGCTCTTGACTCTTCTCGTTGACTTTGTGGCAACGCAGTACTATGAACGCAAACAGGGCCTCGCTCGTGGCGGCGCGGAACGTGGGAAGGAGGAGTTGTTGGGGTCGGGAATCGTGGAAGTTAAGGAGGATGGGAAGGTGTTTGGGGAAGAGGCGTGCGGTGGAATGCACATTGTGGGGATGCATGCTCACGCGGCGCAACATAGACACTCCCACTCATGCCACGATGGCGTTAAGGAACCACAACATGGCCACTCTCACTCTCACTCGTTCGAAGATGACGGGGGAAGTAGCGTCCGCCACGTCGTCGTTTCACAGGTAACATTACATCCTCTGACCTCTCTTTTGGTACTAGAACTTGGGATTGTATCACATTCCATAATTATTGGGCTATCACTTGGAGTTTCACAAAGCCCTTGTACCATGAGGCCCCTAATTGCGGCGTTATCCTTCCATCAGTTCTTTGAAGGGTTTGCACTTGGTGGCTGCATCGCCGAAGCCCAATTCAAGACCTTATCGGCAACAATAATGGCTTGTTTTTTTGGACTAACGACGCCACTGGGTGTTGCCATTGGGACTGGTATTGCTTCAATTTTTAACCCTTACAGTCCAGGAGCGCTCGTTACAGAGGGCATCTTGGACTCCTTGTCAGCTGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCTGATTTTCTCAGCAAGAGAATGCGTTGTAACTTTAAGCTGCAGATAGTGTCTTACTGTTTGCTTTTCCTTGGGGCTGGATTGATGTCTTCGCTCGCAATTTGGGCATGA 1092 0.5211 MCRDESTAFVLKFVAMASILVAGFGGIAIPLLGKQRRFLRSDGMVLAAAKAFAAGVILATGFVHMLKDSWEALNHPCLQSHTWSKFPFTGFFAMMSALLTLLVDFVATQYYERKQGLARGGAERGKEELLGSGIVEVKEDGKVFGEEACGGMHIVGMHAHAAQHRHSHSCHDGVKEPQHGHSHSHSFEDDGGSSVRHVVVSQVTLHPLTSLLVLELGIVSHSIIIGLSLGVSQSPCTMRPLIAALSFHQFFEGFALGGCIAEAQFKTLSATIMACFFGLTTPLGVAIGTGIASIFNPYSPGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMRCNFKLQIVSYCLLFLGAGLMSSLAIWA. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03416 363 MobiDBLite consensus disorder prediction 166 191 - -
Seca8g03416 363 PANTHER ZINC/IRON TRANSPORTER 10 356 - -
Seca8g03416 363 NCBIfam ZIP zinc/iron transport family 2 363 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca8g03416 363 Pfam ZIP Zinc transporter 10 360 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03416 Seca-Chr8 98144314 98150605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03416 1 363 Inorganic Solute Cotransporters AT1G10970 67.120 7.53e-159 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03416 K14709 - gmx:100812212 501.516