Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03398 ATGAGACGAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCAAGGGCATGTATTGGTCAGAAATTTTCCTTGCAAGAGATCAAGCTTACCCTGATTCATTTATACAGAAAATATGTGTTTCGTCATTCACTTAACATGGAAAAGCCTGTAGAACTGGAATATGGTATAGTTCTCAACTTCAAGCATGGTGTCATGCTTAGAGCCATGAAAAGAACATAG 225 0.3822 MRRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYVFRHSLNMEKPVELEYGIVLNFKHGVMLRAMKRT. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03398 74 SUPERFAMILY Cytochrome P450 3 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03398 74 PANTHER THROMBOXANE-A SYNTHASE 2 73 - -
Seca8g03398 74 Pfam Cytochrome P450 3 61 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03398 74 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 12 21 IPR017972 GO:0005506|GO:0016705
Seca8g03398 74 Gene3D Cytochrome P450 1 74 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03398 Seca-Chr8 97588483 97588707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03398 2 73 Cytochrome P450 AT2G26170 73.611 3.30e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03398 K20771 - gmx:100805689 140.584