Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03397 ATGAGGACGTGGGAATCCTCGATCGAGCGGGACAAACACATGTTTTGTCCGTTACACGTTTTGAATTTCAAATCTCCAAAACGGCCTCCAAACACACACACACACACGACACACAACCCACTACCCACTCATCAAAACACAGAACACCACCATAGCATAACAAAATCCCCACTCATCTCTTCTTTCCCTCTCCCTCTCTCTCCACCAACATTCACTAATCATTATTGCCTTCACACAGCTCATAACTCAACTTTCCCTCCTTTCCCCTCTCTCTCTCTAACTCAATCTCAGTTTGTTTATCCAACAACAAACGGTTTCGCAATCAAAATGGGCGCATCTGGAAAATGGGTAAAAGCATTAATCGGGCTTAAGAAGCCCGACAAGGCCGTTGAACACGCGAAGGAGGGTGGTGGGAAGAGCAAGAAGTGGAGGTTATGGAAGAGTTTTTCAGGTTCAGGGGACATTGGGAGCTTCAGAGGAGGGTCTGAATCTGAAGGGTCTTATTCCCCATCTGTGGCAGCGGATGCTTTCACAGCTGCAGTGGCCACTGTGGTTCGAGCTCCACCTAAGGATTTCAAACTCCTAAGGCAAGAATGGGCCGCAACCCGAATCCAAACTGCTTTCCGCGCCTTCTTGGCACGAAGGGCATTGAGGGCTTTGAAAGGAGTGGTGAGGCTTCAAGCTCTTGTACGGGGTAGATTGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCCTAGTTCGTGTTCAAGCACGTGTAAGAGCTAGAAGGGTGCGAATGTCCATAGAGGGACAAGCTGTGCAGAACATGCTCAATGAGAGGCGCACCAAGGCTGAACTCTTGAAACAAGCTGAGGAAGGATGGTGTGATAGCAAAGGAACATTGGAAGATATCAAAACAAAACTACAGATGAGGCAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTTTCCCAGAAGCAATGGAGACCAACCCCCATGTCCAATTCAAGAGCAAACGCCTCACTTTCCTCTCTCAACAATCACCACGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCTTGGGAGAGTAGATTAATGGAGCAACAAACCCATGCTGCTGATGCCTCAGATAAGACCCCTCCACCTCCAAAGAAATGCATGGACTCTTCAAATTCCAAAACATCAGAACCATGCACTGTCAAAGTCAGAAAGAACAATGTCACCACAAGGATTTCTGCTAAACCTCCCCATATTGGGCAAGCTACTCGTTCACCCTCAAGTCCAAGTTCTGAGTTTCAATATGATGAGAGCTGTGCTTCATCTTCAATATGCACATCTACAACACCAGTATCTGGGAATGCTGCAGCATTGGCTTGTGACAGGACAGAGGATAGTAGTAACAGTAACACTAGGCCAAGTTACATGAACCTCACTGAGTCAACCAAGGCAAAGCAAAAAAACAGCAATCACTACAACAGAGCTCAAAGGCAGCAATCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCTGTTTTCTCTAATGGGGACTCCAATAGCACTGCTGGTTCTGACCCTTCAATCAACTATTCTAGGCCACTTTACCTACCAACTTATTTGGATAAGAGGGCACGCTGA 1662 0.4729 MRTWESSIERDKHMFCPLHVLNFKSPKRPPNTHTHTTHNPLPTHQNTEHHHSITKSPLISSFPLPLSPPTFTNHYCLHTAHNSTFPPFPSLSLTQSQFVYPTTNGFAIKMGASGKWVKALIGLKKPDKAVEHAKEGGGKSKKWRLWKSFSGSGDIGSFRGGSESEGSYSPSVAADAFTAAVATVVRAPPKDFKLLRQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELLKQAEEGWCDSKGTLEDIKTKLQMRQEGAFKRERAIAYSLSQKQWRPTPMSNSRANASLSSLNNHHEIDKANWGWSWLERWMAAKPWESRLMEQQTHAADASDKTPPPPKKCMDSSNSKTSEPCTVKVRKNNVTTRISAKPPHIGQATRSPSSPSSEFQYDESCASSSICTSTTPVSGNAAALACDRTEDSSNSNTRPSYMNLTESTKAKQKNSNHYNRAQRQQSMDEFQFLKRTAVFSNGDSNSTAGSDPSINYSRPLYLPTYLDKRAR. 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03397 553 MobiDBLite consensus disorder prediction 469 506 - -
Seca8g03397 553 ProSiteProfiles IQ motif profile. 197 225 IPR000048 GO:0005515
Seca8g03397 553 MobiDBLite consensus disorder prediction 27 43 - -
Seca8g03397 553 MobiDBLite consensus disorder prediction 375 442 - -
Seca8g03397 553 MobiDBLite consensus disorder prediction 523 553 - -
Seca8g03397 553 ProSiteProfiles IQ motif profile. 221 248 IPR000048 GO:0005515
Seca8g03397 553 PANTHER IQ-DOMAIN 5-RELATED 110 516 - -
Seca8g03397 553 SMART iq_5 219 240 IPR000048 GO:0005515
Seca8g03397 553 SMART iq_5 196 218 IPR000048 GO:0005515
Seca8g03397 553 MobiDBLite consensus disorder prediction 394 442 - -
Seca8g03397 553 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03397 Seca-Chr8 97585115 97588296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03397 110 550 IQD Protein Family AT2G26180 58.575 2.41e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03397 - - gmx:100787102 585.489