Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03396 ATGATTCTATTGGATAAAAAGGAAAATCCACTACATGTAGCAGTTTGGAAAAATTTAATTCCTCATTTCAAACACATTTTACAAAAAGGAATCATTTATAGCATCAAAATTTTGCAACTACGCGAACCAAATGACACCTATAAACCAGTGAAAGGGACAATAAAGGGATGGTTCTTGCTGACAACTACGTTGACAAAGTTAAATGATCCTTGTGTCATCATTCCTACACATTACTTTGAATTTGCAACGCTTCAAATCATCAACGAAAGGATATCAAACAAGAATTTGTTAACGGATATCATTGGATCACTCCATTCGGTTGGACATGAAGAAGAAAAAGTAAATGTCAAGGGCAAGCAAACAAAAATACGTCGACTGCAGTTGAAACTCAAAGAGAATGAAATTATCAAAGTTACCTTGTGGAGAAATATAGCAATGGAATTCGAGAAAATTATTAACAGCCACAAAGAGGAATCCAAGACAATCGCCATCACCTCCACTGTTATCAACACATTTAAAGATGACTACTCAATCAACTCAACTTCAAGTACAAGAATCTACGTCAACCTAGACAATCCTGAATTTCACCACTTTCAACAAGGGATCACAAATCAAGATCAAGAAATAATGGAGATCCCAAGTCAGGCATTTTCACATTTAAGTCCCAAAGAAAGAATGCAAAGAAATAAAAGAACACTGCAAGACATTATGTCAATGAAATGGGAATAA 729 0.3471 MILLDKKENPLHVAVWKNLIPHFKHILQKGIIYSIKILQLREPNDTYKPVKGTIKGWFLLTTTLTKLNDPCVIIPTHYFEFATLQIINERISNKNLLTDIIGSLHSVGHEEEKVNVKGKQTKIRRLQLKLKENEIIKVTLWRNIAMEFEKIINSHKEESKTIAITSTVINTFKDDYSINSTSSTRIYVNLDNPEFHHFQQGITNQDQEIMEIPSQAFSHLSPKERMQRNKRTLQDIMSMKWE. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03396 242 Gene3D - 1 69 IPR012340 -
Seca8g03396 242 Gene3D - 74 236 IPR012340 -
Seca8g03396 242 CDD RPA1_DBD_B_like 99 200 - -
Seca8g03396 242 Pfam Replication protein A OB domain 93 189 IPR031657 -
Seca8g03396 242 SUPERFAMILY Nucleic acid-binding proteins 93 202 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03396 Seca-Chr8 97546766 97554443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03396 3 199 Core DNA Replication Machinery Family AT2G06510 24.378 3.77e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03396 - - cam:105852911 222.246