Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g03338 | ATGACTACTAAAAAGAGTACATGGAAGTCTGTGATCTTGATCTTAAGTTGTTACAAGATTAAATTCCCATTGGAGGAATCAGAGAAACAGGATTTAAAACAGGGTTCTTTCCATAGGCTATTGCTATCAGATATAAGCAATTCAAGCTCCTCTCAGGCAATTGAAGATCTTTCAATTTCCCTCGCTGGCTCTAAACTTTACACATTCACCCTTGAGGAGCTAAGAGAAGCAACACATAATTTCACATGGAGTAACATGCTTGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGGTTTTTTGATGACAAACTTAGGCGTGGGTTGAAGGCTCAGACTGTTGCTGTGAAACGATTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAACTGAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGATGAACACAGGCTTTTGGTGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGTATGTTGTTTTTCTATCTTCTACTCCTTTTCTCACACTTTCCCCAAAAAGGCAAGATAATACAAGCAGGATACTCTGCTGCCATGCCATGGTCAACCAGGATGAAAATTGCTTTGGGAGCGGCTAAGGGTCTGGCCTTCCTTCACGAAGCAGATAAACCTGTAATTTACAGGGATTTCAAAGCTTCAAACATCTTACTAGACTCAGACTATACAGCTAAACTCTCAGACTTTGGTCTAGCTAAGGATGGTCCTGAAGGAGAAGAGACACATGTAACAACAAGGATAATGGGAACACATGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTCACAACGAAGAGTGATGTGTATAGCTACGGAGTGGTTCTGTTGGAATTGCTAACTGGAAGACGGGTAGTGGATAAGTCCCTAGCAAATCGAGGAAAGAGCTTGGTGGAATGGGCAAGGCCTATGTTGAGAGATCAGAAAAAGCTGCACCGTATCATAGACCGTAGACTTGAAGGTCAATTCCCTACAAAAGGAGCCATGAAGGTTGCTATGTTGGCTTTTAAATGCTTGAGTCACAACCCAACTCCAAGGCCTTCCATGAGTGATGTGGTGAAGGTATTGGAACCACTTCAAGACTTTGACGATGTTCTCATAGGACCATTTGTCTATGTTGCCGTAAAAGAAAATGGAGACAAAGATAAAATATAG | 1230 | 0.4268 | MTTKKSTWKSVILILSCYKIKFPLEESEKQDLKQGSFHRLLLSDISNSSSSQAIEDLSISLAGSKLYTFTLEELREATHNFTWSNMLGEGGFGPVYKGFFDDKLRRGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLVYEYMPRGSLENQLFRSMLFFYLLLLFSHFPQKGKIIQAGYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSLANRGKSLVEWARPMLRDQKKLHRIIDRRLEGQFPTKGAMKVAMLAFKCLSHNPTPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVKENGDKDKI. | 410 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g03338 | 409 | CDD | STKc_IRAK | 87 | 384 | - | - | |
Seca8g03338 | 409 | Gene3D | Phosphorylase Kinase; domain 1 | 43 | 163 | - | - | |
Seca8g03338 | 409 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 194 | 390 | - | - | |
Seca8g03338 | 409 | Gene3D | Transferase(Phosphotransferase) domain 1 | 189 | 391 | - | - | |
Seca8g03338 | 409 | ProSiteProfiles | Protein kinase domain profile. | 81 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g03338 | 409 | Pfam | Protein tyrosine and serine/threonine kinase | 83 | 381 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g03338 | 409 | FunFam | Serine/threonine-protein kinase BIK1 | 47 | 163 | - | - | |
Seca8g03338 | 409 | PANTHER | OS01G0588500 PROTEIN-RELATED | 50 | 385 | - | - | |
Seca8g03338 | 409 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g03338 | 409 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 381 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g03338 | Seca-Chr8 | 95762728 | 95765620 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g03338 | 68 | 381 | Glycoside Hydrolase | AT3G07070 | 50.794 | 1.26e-99 | 301 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Seca8g03338 | PK_Tyr_Ser-Thr | 1.6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g03338 | - | - | gmx:100802636 | 667.151 |