Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03336 ATGATGCACATGACGTTGTATTGGGGCACAAAGGTGACCCTTCTCATCGATTCGTGGAAGACCGATTCGTGGACGAGTTACGCACTGAGTTTACTCGCGTGCCTCGTGATTTCCGCTTTCTACCAGTATCTGGAGAATCTCCGGATTCGGCTAAAGCTCTTCGCCGGCGGGAGGAGGCCCTCTCTGGTGGCATCGCCGGAGATCCAGACCCCTCTTCTTCGGTGGAATAATGTCCCCAGAGACAATGTCGCCGAAGCGGTTCTGTTCGGGGTGAACTCGGCGATTGGGTATTTGTTGATGTTGGCCATAATGTCCTTCAACGGAGGGGTCTTTGTGGCCATCGTGGTGGGCCTGACCCTCGGTTACTTCTTCTTCAGGGGTCAGGGCGAAGATGCTGGGCTTGTCGATGACAATTCTTGTGCATGCGCTTAG 432 0.544 MMHMTLYWGTKVTLLIDSWKTDSWTSYALSLLACLVISAFYQYLENLRIRLKLFAGGRRPSLVASPEIQTPLLRWNNVPRDNVAEAVLFGVNSAIGYLLMLAIMSFNGGVFVAIVVGLTLGYFFFRGQGEDAGLVDDNSCACA. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03336 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 131 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca8g03336 143 Pfam Ctr copper transporter family 4 125 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03336 Seca-Chr8 95684495 95684926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03336 1 143 Inorganic Solute Cotransporters AT5G20650 56.164 5.69e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03336 K14686 - gmx:100795071 225.713