Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03335 ATGGCGGCGAAGGTTCATGAGGCGGCGGTGGCGGAAGTGGAGGCGGCGGTTTCCACCGTGAAGTGCTGTTGCTGCGGGTTGATGGAGGAGTGCACGCACGCGTACATTGCTCGCGTGAAGGAGAGGTTTGGTGGTCGTTGGATTTGTGGACTTTGTGCTGAGGCAGTTAAAGAAGAGAAGGTGAGGTCGTCGCAGATGATAACAATGGATGATGCTCTGAAACGACACATCAAGTTCTGCCAACAGTTCAGTTCTTCATCTCCTCGTAACGATGACTTCATACTCGCCATGAAGCAGATCCTTTTTCGTACCTTGGATTCTCCAAGGAAGGAGCGTTTCACTTGTAGACCTCTTGGTAGATCTCACAGCTGTTTCTCAGCCATGCAAGCAACTCCACCACAGGCAGAGACACACTCAGAGTGA 423 0.5177 MAAKVHEAAVAEVEAAVSTVKCCCCGLMEECTHAYIARVKERFGGRWICGLCAEAVKEEKVRSSQMITMDDALKRHIKFCQQFSSSSPRNDDFILAMKQILFRTLDSPRKERFTCRPLGRSHSCFSAMQATPPQAETHSE. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03335 140 Pfam Protein of unknown function (DUF1677) 17 103 IPR012876 -
Seca8g03335 140 PANTHER OS01G0745000 PROTEIN 9 130 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03335 Seca-Chr8 95636192 95636614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03335 - - gmx:100795601 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03335 8 95636192 95636614 Seca8g03335 8 95636192 95636614 ECH
Seca4g01164 4 18615728 18617116 Seca8g03335 8 95636192 95636614 ECH
Seca12g00609 12 5502087 5502548 Seca8g03335 8 95636192 95636614 ECH
Seca4g11652 4 256372752 256373234 Seca8g03335 8 95636192 95636614 ECH