Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03262 ATGGATTCTATATGCGTCGATACTTCACTCAATCTCAACGCTGTTCCTTCTCTGCACATGCAGGATGAGGTTTTGGTTGAAGAGTTGCATCGCCTAAGTTGTGAGAACAAGAAGCTGAGTGAGACACTGAGCCATATGTGTGAGAACTACCAGGCTATGCAAAAGCAATTGACCCAATTGATTAACAAGAATTTTGAGCACCCAACACGGAAGAGAAAAGCTGAGGGTGAAAATTGTAGTGTTAATATGATTGGTATTAGAGGCAACATTAATACTGAGTGCAGCACAATCACAATTACTGAGGATGAGCCATTAATCAAAAGGCCCAATATCACCTCGCCCAAGGTTTCCAAGGTTCTTGTGAAGACCGAAGCTTCAAATACTAGCTTATATGTGATGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTGACTAGAGATAACCCCTCTCCTAGAGCTTACTTCAGGTGCTCCTATGCCCCAAGCTGCCCGGTGAAAAAGAAGGTGCAGAGAAGTTTAGAAGACCCTACTATTCTGGTTGCAACTTATGAAGGAGAGCACAATCATGGTCATCAGCGAGCTGAAATTCCGCTTGTTTCAGGGCAAAGTGAAGAAGCCCCTGTAGCAGTAGGATCAGGTCCTGTTTCCTCACCTAAACCCATTATTATTCCAAGCACGTGTCCAACTATAACGCTTGACTTGGTCAACAATGTTCAAAAGTCGTCTATCCAGCAATTTCTAGTTCAACAAATGGCTACTTCTTTGACAAAGGATCCCAATTTCACAGCAGCACTTGCCACTGCTATTTCAGGAAGAATTCTAGACCAGACTTCTGTGGCCAAATGGTGA 852 0.4343 MDSICVDTSLNLNAVPSLHMQDEVLVEELHRLSCENKKLSETLSHMCENYQAMQKQLTQLINKNFEHPTRKRKAEGENCSVNMIGIRGNINTECSTITITEDEPLIKRPNITSPKVSKVLVKTEASNTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVQRSLEDPTILVATYEGEHNHGHQRAEIPLVSGQSEEAPVAVGSGPVSSPKPIIIPSTCPTITLDLVNNVQKSSIQQFLVQQMATSLTKDPNFTAALATAISGRILDQTSVAKW. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03262 283 ProSiteProfiles WRKY domain profile. 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g03262 283 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g03262 283 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g03262 283 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g03262 283 SUPERFAMILY WRKY DNA-binding domain 130 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g03262 283 FunFam WRKY transcription factor 40 117 194 - -
Seca8g03262 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 274 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03262 Seca-Chr8 93568382 93569767 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03262 3 282 WRKY Transcription Factor Family AT1G80840 45.048 2.02e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g03262 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03262 - - gmx:100810978 335.109