Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03257 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAACCCCCCGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTGATGGAAGAAGATGAATATAAAGTGTATATAGCGGGAATAATTGCGCAACTTCGTGATTATTTCCCTGATGCTTCATTTATGGTGTTCAATATGCGGGAGGGAGAAAACCAAAGCCAGATATCAAACATTTTGTGTGACTATGATATGACTGTGATGGACTATCCTCGACAGTATGAAGGTTGCCCGTTACTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTGGCATTTATGCTGGCCGCACTCTTGATTTATAGGAAGATGTTTACAGGGGAGCAGAAAACTCTAGACATGATATACAAGCAAGCTCCTCGGGAATTTTTGCAGTTGATGTCACCATTGAATCCAATACCTTCACAATTGAGGTATCTTCAGTATATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTAGATAGGGCACTTACATTGGACTGTGTAATCATGAGACTCATTCCTAACATGGATGGAGAAGGTGGTTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCTGATCGGACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTTCGGCAGTACAAGCAGGCTGATTGTGAACTAGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTTGTTCTTGAGTGTATTAGTTTGGACAGTGATTTGGAACGTGAACAAATGATGTTCCGGGTGATGTTCAATACAGCATTTATAAGATCAAATATTTTGATGCTTAACCGTGACGAAATTGACATGTTATGGAATGCCAAAGATCACTTCCCTAAAAGTTTTAGAGTAGAGGTTCTTTTCTCGGATATGGATGCTTCATCTTCTGTTATTTCAATTGATCTGCCTCGTATTGAGGAGAAAGAAGGCCTACCTGTTGAGGCTTTTGCAAAGGTTAAGGAAATTTTCAGCCATGTTGATTGGCTAGATTCAAAACCAGAGGTAGCAAATGTGCTCCAACAGATCACAGCATCAAATATCCTTCTGGAAAGGTTGGACAGCGGGGTTTCTGCATCACCGAGTAGCTTACTTAAGGAGTCATTGTCTGGAAGATTTAAATTTGATTCAAAGTCACAAAATGATACAAATAGTCCGACTTCTGCAGTTCGGGGGAGATTTTCTTTGTCCTCATTGGAAGATTCTGGGGATGCTCCTATAGAGAAGAAGATAGAACCATTAGAATCAAAGACACTGTCAGAAAACAACAACAACAACACACTTGCATCTTTAGGTCAGGAGAACCATCCTATTCCTTTGTTTGGGCTCTCAACAGATTCAGATTCTTCTAAAAAGGAGACCAGATCATTAGAATCAAAACAATCATTGAAAAATGATACCGAATTTCCTACTTCTATGGATCAGGAGAAACAATCTATCCCCTTAATTGAACCATCTATGGATGCAGATTCAATTGAAAAGAAGATTGGGTCATTGGAATATGAGGAAAATGATATTGAATCATTAGCATCAAAGGTAATGTTGGAAAATGAAACCGAGTTTCCTACATCCATATCTCAAAGGGAACAATCTATTCACTTAATTGAACCATCCACTGATGCAAATTCAATGAAAAAGAAGATTGGACTGTTAGGATCAAAGGAAAAGGAGATTGAATCGTTAGACTCAGAGGCATTGTCTGAAAATAATAGAAGATTTAAATTTGAACCAAAGATACTGCCAGAAATTGCTGTAAGAATCCCGACTCCTGTAGTTCAAGAGAAACCTTCTATGTCCTCATTTGAACCATCTGGGGATGCTCCTATGGAAAAGAAGAAAGAACCTTTAGAATCGAAGGCATCAGCAGAAGGTAACATCAAGACTCTTGCACCCATGGGTCAGGGGAAACAACCCATTCCCTCACTTGGACTCTCAACAGATTCACATTCTGCTACAATGCAGATTGAATCATTAGAATCAAAGGCATTGGTGGAAAATGATACTGAGGTTTCTACATCTATGGCTCAGGGGAAAAAGTCTATTCCCTTAACTGAACCATCCATGTATGCAAATTCAATGAAACATAAGATGGGACAATTAGAGTCAAAGGGAAAGGATATTGAATCATTAGAATCAAAGTCATTGATAGGAAATGATGCCAAATATCTTCCATCTATGCCTCAGGGGAAACAATCAATTCCGTTAATTCAACCATCCACGGATGCAAATTCAATAAAAAAGAAGATTGGGCAATCAGAATCAACGGTGTTGTCAGAAAATGATATCAAGAGTCTCACATCCACAGTTCAAAGGAAACAAAATAGTCCCTTAATTGAACCGTTCATTGATGCAAACTCAATTAAAAAGAAGATCGAACCTCAAGAAATGCAGGTTGCTCTTCAGCTACCCACCCAATCTAAAATAATTTCTCCACGGGTGCGTCAACCTATTCGATCTGCTCCAGCTTCTTATTCTAACTCCTTGCAAGGTTCGCCTGTAGCTATCTCAAGATATCATAGTGCACCATCGGCTCTTGGAATAACAACTGTGTTGCAGGATCATACACCAATGGATATCAAAGAAGAAGTCACTCCTGCAGTGACAATATCTTCTGCTTCTTGGCCTTCTTCAAAATCAAAGGTGCCAAAATCCATAGAGCCTAGTTCTACAAGTGTTCCTCCAACATCATCATCAACATTGCTTTCATCTATGCCATTAAAATCTTCAGTGGATGCTGTTGTTGCCATGGAGAAAACTTTTGGACCCCTTGCTCCTGCTCCTCCACCTCCACCTCCAACTTCTCAATGTGAGCCTACTTCAAAATTGATGCAACCTATTGTTACACAGAACCATGAAAATACAATGCATGATAAAGATCAGAAATCATTGGTTACTCCTCCTTCTCCTCCCCCTCCTCCACCTCCTCAACATGAGGCTACTTCAAAATCGGGGCAATCTATTGTTACACAGAACCCTGAAAATACAATGCATGATAAAGATAAAAAATCATTGGTTACTCCTCCTCCTCCTCTTCCCCCTCCACCTCCACCTCCACCTCTACCTCCTCAATGTGAGCCTCCTTCAAAATTGATGCAATCTATTGTTACTCAGGACCCTGAAACTACAATGCATGATAAAGGTCAGAAATCATTGTCTACTCCTCCTCCTCCTCCTCCTCCCCCTCCTCCTCCACCCCTTCCTTTTGAGCCTATCCAAAGCTCTCTTTCACAGCCTTTTCCTCCAACCCCAGGTCTTTCTTCTCCATCTTCTGCCAAGAAGAGCTCATCTTTATCCCATCCACCACCCTCATTTAAAGGTCCTCCTCCCCCACCTCCACCTCCATCTTCAACTGGACAGACTTCATCATCTTCAATACCACCTCCTCCTCCTCCACTGTCTGGGTTTCCTTCTTCAGTTTCCTGTCCTTTTTCTTCTCCATTGAGTATGAACAAGTCTGCTGTTATGGCTGGTCCTCCTCCCCCACCTCCACCTCCTGGACATTCTGGCACTGCACCTGCCTCTACTTCTACACCATCAGTGCCACCTCCACCCCCTCCTCCTGCTTCTGCATCCCAAAATTCTCTGTCTAATAACTCTGCAAATGTTCCACCTGTACCCCCACCTCCTGCCCCTTCTGCCAATGGATTATCAAACTCTGGCGCTGCTTCCCAGCATGCACCTCCAGTTCCTGGACCACCTTCAGCTCCATTTGGTGCAAAAGGACGTGGCCTATTGCGAGCTAATCCAAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTTAAACCTTACCATTGGTTAAAATTAACAAGGGCCATGCAAGGAAGCCTATGGGCTGAGACACAGAAACTTGATGAAGCTTCTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTCTTTTCTCTGCAGCTGCTCCAAATTCTGATCGTGAAAAAGGAGGAAAAACAAATCGTCGTGCCTCAGGGAATAAACCTGACAAAGTTCAATTGATTGAGCTCAGACGGGCGTATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATTTAATGAGTGCCGTGCTTGCATTGGACGATTCAGTATTAGATTCTGATCAAATTGAGAACCTCATAAAGTTCAGTCCAACCAAAGAAGAGATGGAACTGCTCAAGGGATATAATGGAGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCATAGAATTAATGAAGGTTCCAAGAGTAGAAAGCAAGCTAAGAGTTTTCTCTTTTAAGATACAATTCTCCTCCCAGGTTTCAGAGCTTAGAAGGGACTTGAATATTGTAAATTCTGCATCTGAAGAGATCAGGAATTCAGTCAGGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGATTGGATAGTCTCCTTAAACTCACTGATACACGAGCCCGAAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTTTAGCTTTCCCCAAAGACCTAGTGAGTTTGGAGGCTTCAACCAAGATACAATTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCCGTGTCAGACAACTTCTGCCAGATTCTGAAGGAATTTCTTTCTCATGCTGAATCTGAAGTGAGGTCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTCTATACTTCGGAGAAGATCCAGCACGTTGCCCTTTTGAACAAGTTGTTTCTACTCTGCACAACTTCGCGAGGATGTTCACCCGAGCACATGATGAAAATTGCAAGCAGCTTGAATTTGAAAAGAAGAAAGCAGAGAAAGCAGAGAAGGAAGCAGAAAATGAGAAGTTGAAGCTAGGTGCTAAAAAAGAGTCTGAACATATGTTCCACAGTGTTGAAATTTTCATCTGGTTGGATGAAGAAAACAGTTTTGATAAGTGCAAAATCATTGTTAGTGGCAGCATTGACATTGATGCAGAAAAGCGGTTGTATGGTGTGAAGTTCAGTGAGGCATGGTCAAGTATTTTGGTGTACAATGTATTTGATATAGTTTTGTTCTGA 5310 0.4156 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYKVYIAGIIAQLRDYFPDASFMVFNMREGENQSQISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPVLAFMLAALLIYRKMFTGEQKTLDMIYKQAPREFLQLMSPLNPIPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIMRLIPNMDGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRQYKQADCELVKIDIHCHVQGDVVLECISLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKSFRVEVLFSDMDASSSVISIDLPRIEEKEGLPVEAFAKVKEIFSHVDWLDSKPEVANVLQQITASNILLERLDSGVSASPSSLLKESLSGRFKFDSKSQNDTNSPTSAVRGRFSLSSLEDSGDAPIEKKIEPLESKTLSENNNNNTLASLGQENHPIPLFGLSTDSDSSKKETRSLESKQSLKNDTEFPTSMDQEKQSIPLIEPSMDADSIEKKIGSLEYEENDIESLASKVMLENETEFPTSISQREQSIHLIEPSTDANSMKKKIGLLGSKEKEIESLDSEALSENNRRFKFEPKILPEIAVRIPTPVVQEKPSMSSFEPSGDAPMEKKKEPLESKASAEGNIKTLAPMGQGKQPIPSLGLSTDSHSATMQIESLESKALVENDTEVSTSMAQGKKSIPLTEPSMYANSMKHKMGQLESKGKDIESLESKSLIGNDAKYLPSMPQGKQSIPLIQPSTDANSIKKKIGQSESTVLSENDIKSLTSTVQRKQNSPLIEPFIDANSIKKKIEPQEMQVALQLPTQSKIISPRVRQPIRSAPASYSNSLQGSPVAISRYHSAPSALGITTVLQDHTPMDIKEEVTPAVTISSASWPSSKSKVPKSIEPSSTSVPPTSSSTLLSSMPLKSSVDAVVAMEKTFGPLAPAPPPPPPTSQCEPTSKLMQPIVTQNHENTMHDKDQKSLVTPPSPPPPPPPQHEATSKSGQSIVTQNPENTMHDKDKKSLVTPPPPLPPPPPPPPLPPQCEPPSKLMQSIVTQDPETTMHDKGQKSLSTPPPPPPPPPPPPLPFEPIQSSLSQPFPPTPGLSSPSSAKKSSSLSHPPPSFKGPPPPPPPPSSTGQTSSSSIPPPPPPLSGFPSSVSCPFSSPLSMNKSAVMAGPPPPPPPPGHSGTAPASTSTPSVPPPPPPPASASQNSLSNNSANVPPVPPPPAPSANGLSNSGAASQHAPPVPGPPSAPFGAKGRGLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEASRAPEFDMSELETLFSAAAPNSDREKGGKTNRRASGNKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLALDDSVLDSDQIENLIKFSPTKEEMELLKGYNGDKDNLGKCEQFFIELMKVPRVESKLRVFSFKIQFSSQVSELRRDLNIVNSASEEIRNSVRLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLAFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSDNFCQILKEFLSHAESEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLHNFARMFTRAHDENCKQLEFEKKKAEKAEKEAENEKLKLGAKKESEHMFHSVEIFIWLDEENSFDKCKIIVSGSIDIDAEKRLYGVKFSEAWSSILVYNVFDIVLF. 1770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03257 1769 MobiDBLite consensus disorder prediction 463 479 - -
Seca8g03257 1769 SMART PTEN_C2_2 197 337 IPR014020 -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 421 441 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1010 1024 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1051 1072 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1183 1197 - -
Seca8g03257 1769 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Seca8g03257 1769 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1296 1696 IPR015425 -
Seca8g03257 1769 PANTHER FORMIN-J 1 638 - -
Seca8g03257 1769 Coils Coil 1674 1708 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1132 1146 - -
Seca8g03257 1769 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Seca8g03257 1769 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Seca8g03257 1769 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1097 1131 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 494 508 - -
Seca8g03257 1769 Pfam Formin Homology 2 Domain 1298 1670 IPR015425 -
Seca8g03257 1769 Gene3D - 196 341 - -
Seca8g03257 1769 SMART it6_source 1099 1746 IPR015425 -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 983 997 - -
Seca8g03257 1769 Gene3D Formin, FH2 domain 1315 1710 IPR042201 -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 914 950 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 421 522 - -
Seca8g03257 1769 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 652 666 - -
Seca8g03257 1769 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1371 1698 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1025 1039 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1222 1236 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1347 1371 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1075 1095 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 968 982 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1147 1182 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 1201 1215 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 967 1308 - -
Seca8g03257 1769 MobiDBLite consensus disorder prediction 636 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03257 Seca-Chr8 93464917 93478133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03257 793 900 FH2 protein (formin) Gene Family AT2G25050 36.937 1.20e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03257 - - lja:Lj5g3v0483820.1 2062.73