Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03247 CATCACCATCACCATAAATACAACTCCCCAACCCACCTGAAAAACCATCTTCTGTCTCTCACTTGTTTTCGTATCTGTGAGATACAAATACAAAGGCAAAAAAACACACTTATCAGAACAATGACTGATTCTTCAACAGCTTCTTATCTTTTGCTCTTATTCCTTCTCTTTGGTTTCTCTTCAGCTAGGGAAATCTTGGTTGGAGGCAAGCCAGATTCATGGAAGATTCCATCTTCTGAATCAGACTCACTCAATCAGTGGGCAGAAAGGTCTCGCTTTCTAATTGGCGACTATCTTGTTTGGAAATATGATGGTGGGAAAGATTCAGTTTTGCAAGTGAGCAAGGAGGGTTATGCTAATTGCAGCACCTTAAACCCCATCAAAGAGTACAATGATGGGAACACAAAGGTGAAGCTTGACCGTCCTGGGCCATTCTACTTCATCAGTGGGGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTATTGTGGTGGTTTTGACCCCAAGGGGTAGCACTTACACTGCTAATCCTCCTGCTTTTGCTCCTGCTACTGCTCCTTCTCCAGCAGGGTTTGAAGGTCCAGCTGTAGCTCCAAGTCCAACTAGCACTGCCACAACTTTGCAGGGTGGGTTTGTGATGGGTTTGGGAGTAGTTGCTATGTGGGTTTTTTTATTTGATTTGATTTTATGTGAATTGCCTCATTTCATTGGATTTTATTCATATTAG 726 0.4311 HHHHHKYNSPTHLKNHLLSLTCFRICEIQIQRQKNTLIRTMTDSSTASYLLLLFLLFGFSSAREILVGGKPDSWKIPSSESDSLNQWAERSRFLIGDYLVWKYDGGKDSVLQVSKEGYANCSTLNPIKEYNDGNTKVKLDRPGPFYFISGAKGHCEKGQKLIVVVLTPRGSTYTANPPAFAPATAPSPAGFEGPAVAPSPTSTATTLQGGFVMGLGVVAMWVFLFDLILCELPHFIGFYSY. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03247 241 Gene3D - 61 169 IPR008972 -
Seca8g03247 241 ProSiteProfiles Phytocyanin domain profile. 63 167 IPR003245 GO:0009055
Seca8g03247 241 Pfam Plastocyanin-like domain 74 159 IPR003245 GO:0009055
Seca8g03247 241 SUPERFAMILY Cupredoxins 62 166 IPR008972 -
Seca8g03247 241 PANTHER BLUE COPPER PROTEIN 64 182 IPR039391 GO:0009055
Seca8g03247 241 FunFam Early nodulin-like protein 1 62 170 - -
Seca8g03247 241 CDD OsENODL1_like 63 166 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03247 Seca-Chr8 93159146 93160123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03247 41 225 Phytocyanin Superfamily AT4G31840 52.660 3.97e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03247 - - gmx:100527857 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03247 8 93159146 93160123 Seca8g03247 8 93159146 93160123 ECH
Seca8g03247 8 93159146 93160123 Seca4g01084 4 17495335 17495959 PCT