Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g03235 | ATGCAATACGAGGGTGATGGAAGAGCCAGCAACGGTTCCATAGACCTTAACAAAGTGAGTTACCTTTTCCGTGTAGGAAGAGCCATCTACGGTGAACCACTTCACTTATGGGACTCATCTTCGAGGATTCTCACGGACTTCACCACGCGCTTCACCTTCACAATTGATAAGGTAAACGACACGTCGTACGGCGATGGCTTTGTGTTCTATTTAGCTCCTGTAGGTTACCAAATTCCGCCAAACTCAGCTGGTGGCGTTTTTGGAATATTAAACGCCACCACCAACAGCGACCCTCAAAACCATGTGTTTGCCGTAGAGTTTGACACCTTTGTGGGCTCCATTGACCCACCAATGAAGCATGTGGGAATAGACGACAATTCTCTCACGTCCGTCGCTTTTGCCAAGTTCGACATTGATAGAAACCTCGGTAAACCCTGTCTCGCTTTGATTACTTACACTGCTTCCACCAAAACGCTCGCCGTTTCTTGGTCCTTTGACGGAAGAATCAAAACAAACGATCCCAATTCTTCTATTTCTTACCAAATTGACCTTATGCAAATCCTACCTGAATGGGTGAATATTGGGTTTTCAGCTTCAACTGGGCTTTCAACTGAAAGAAACGTTATCCATTCATGGGAGTTCAGTTCAACTCTGAATTCCACTGGCAGCAAAAAATCTAACACGGTTGTGCTTGTTGTTGCTGTTGTTTGTCCTATGATTTTGGTGTTTGTTGCTGCGAGTGTTGTGTTGTTAATAATGAGGAAGAGAAGAGAGAATCTTTATGAGGGTGATGATGAGTATGGAGGAGCCATGTCAGAGAAGTTTGATTTGGATAAAGCAACTATACCTAGAAGATTTGATTATGAGGAATTAGTTGAAGCCACCAATGGGTTTGCAGATGATAGAAGATTGGGAAGAGGTGGGTTTGGTGAGGTTTATAAAGGTACTTTGAGTTGTTTAGGAAGAGTTGTTGCTGTGAAAAGGATCTTTGCTGACTTTGAGAATTCAGAGAGAGTTTTCACCAATGAGGTTAGGATTATAAGCCGTTTGATACATCGAAACTTGGTTCAATTCATTGGGTGGTGTCATGAGCAAGAAGAGTTTTTGCTTGTTTTTGAGTACATGCCCAATGGAAGCCTTGACAGTCATCTTTTTGGGGACAAGAGAACTCTGGCGTGGGAAGTGAGGTATAAGGTGGCTTTAGGTGTGGTCAATGCACTTCATTATCTTCATGAAGATGCAGAGCAGTGTGTTCTTCATAGGGATATTAAGTCTGCTAATGTGTTGTTGGACAATGATTTCAGCACCAAGCTTGGGGATTTTGGGATGGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAGGACAGGGGTGGTTGGGACATATGGGTATCTGGCCCCTGAATATCTCAATGGAGGGAGGGCTAGTAAGGGATCAGATATGTATAGTTTTGGGATTGTGGCTTTGGAGATTGCAAGTGGAAGGAGGACTTATCAGGATGGGGAGTTTCATGTGCCTCTGTTGAATTGGGTGTGGCATCTCTATGTAGAAGGGAATATCCTGGGTGCTGCTGATAAGAGATTGAAGGAGGAGTTTAATGTGAATGAAATGAAAAGCTTGCTCATTGTGGGGTTGTGGTGTACCCACCCAAATGATAAGGAAAGACCCAAAGCAGCACAAGTAATCAAGGTTCTTCAGCTTGAAGCTCCACTACCAGAACTTCCACTTGATATGCATGATCGTCTTCCTCTTCCACCTCCTCCACCACCGATTAGTCAGCCCAATTATTCCTCTCAATCACCACCCATCACTAACAGCCTTGTTAGTGTTGGACGTTAG | 1839 | 0.4399 | MQYEGDGRASNGSIDLNKVSYLFRVGRAIYGEPLHLWDSSSRILTDFTTRFTFTIDKVNDTSYGDGFVFYLAPVGYQIPPNSAGGVFGILNATTNSDPQNHVFAVEFDTFVGSIDPPMKHVGIDDNSLTSVAFAKFDIDRNLGKPCLALITYTASTKTLAVSWSFDGRIKTNDPNSSISYQIDLMQILPEWVNIGFSASTGLSTERNVIHSWEFSSTLNSTGSKKSNTVVLVVAVVCPMILVFVAASVVLLIMRKRRENLYEGDDEYGGAMSEKFDLDKATIPRRFDYEELVEATNGFADDRRLGRGGFGEVYKGTLSCLGRVVAVKRIFADFENSERVFTNEVRIISRLIHRNLVQFIGWCHEQEEFLLVFEYMPNGSLDSHLFGDKRTLAWEVRYKVALGVVNALHYLHEDAEQCVLHRDIKSANVLLDNDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYLNGGRASKGSDMYSFGIVALEIASGRRTYQDGEFHVPLLNWVWHLYVEGNILGAADKRLKEEFNVNEMKSLLIVGLWCTHPNDKERPKAAQVIKVLQLEAPLPELPLDMHDRLPLPPPPPPISQPNYSSQSPPITNSLVSVGR. | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g03235 | 612 | ProSitePatterns | Legume lectins alpha-chain signature. | 188 | 197 | IPR000985 | - | |
Seca8g03235 | 612 | Gene3D | Phosphorylase Kinase; domain 1 | 271 | 374 | - | - | |
Seca8g03235 | 612 | PANTHER | - | 24 | 569 | - | - | |
Seca8g03235 | 612 | CDD | lectin_legume_LecRK_Arcelin_ConA | 1 | 218 | IPR001220 | GO:0030246 | |
Seca8g03235 | 612 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 570 | - | - | |
Seca8g03235 | 612 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 283 | 374 | - | - | |
Seca8g03235 | 612 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 591 | IPR011009 | - | |
Seca8g03235 | 612 | Pfam | Protein kinase domain | 299 | 563 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g03235 | 612 | FunFam | L-type lectin-domain containing receptor kinase IX.1 | 375 | 575 | - | - | |
Seca8g03235 | 612 | MobiDBLite | consensus disorder prediction | 576 | 612 | - | - | |
Seca8g03235 | 612 | CDD | STKc_IRAK | 304 | 566 | - | - | |
Seca8g03235 | 612 | Pfam | Legume lectin domain | 2 | 225 | IPR001220 | GO:0030246 | |
Seca8g03235 | 612 | ProSiteProfiles | Protein kinase domain profile. | 298 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g03235 | 612 | MobiDBLite | consensus disorder prediction | 597 | 612 | - | - | |
Seca8g03235 | 612 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 3 | 218 | IPR013320 | - | |
Seca8g03235 | 612 | Gene3D | - | 1 | 233 | - | - | |
Seca8g03235 | 612 | SMART | serkin_6 | 298 | 567 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g03235 | 612 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 418 | 430 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g03235 | 612 | ProSitePatterns | Protein kinases ATP-binding region signature. | 304 | 327 | IPR017441 | GO:0005524 | |
Seca8g03235 | 612 | MobiDBLite | consensus disorder prediction | 579 | 596 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g03235 | Seca-Chr8 | 92723823 | 92725682 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g03235 | 1 | 578 | Receptor kinase-like Gene Family | AT5G10530 | 46.296 | 0.0 | 525 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Seca8g03235 | Pkinase | 1.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g03235 | - | - | vun:114193012 | 912.524 |