Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03224 ATGGCTGCAAGACATGATGAAAGTGATTCTAGCAGCATGGTTTCCATTTCAAGGATTGTGTCTGTGCATCCAAAACTTGTTCAACCTGATCATCAGAGGGTTTTGAACCTTTCAAATTTGGATAGACAGTGTCCCACACTTATGCATTTGGTGTTTTTCTATAACCTCTCATCATCATCATCTCATCACCAACAAACTTTGATGAATGATTTGTCCCTAAATTCAGTTTTCTCCAGCTTGAAATCTGGGTTGGAAGAGACCTTGAATCTGTGGTATCCAGGTGCAGGTAGGCTTACCCCAAACCAAAGTGATGGAAAGCTTAACCTTTGGTGCAACAACCAGGGTGCAGTTCTTGTAGAGGCTGAAACTCCTGTTAAAATATCACAACTTGGTGACCTCTCTCAGTATAATGAATTCTTTGAAAAGCTGGTTTATAAGCCAGCTTTTGATGGGAATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTTACAAAATTTGGTTGTGGAGGGTATTCAATTGGAATTGGAACAAGTCACTCATTATTTGATGGGCCAGCAACCTATAATTTCTTGTATGCATGGGCTTCAAATTCTGAGATTATGAAAGGAAGGAAATTTGATGAGGTGCCAAAACCAGTGCATGAAAGGGGAATACTACTAAGTGGTAATCATCAACCCCCAAGAAGGACTATGAATTTTCCTTCAAATTCAAACTTAAATAATGTTCAACAAGCAAGAGCCATGGCAATAGACCATCTATATCAACTTATAATGCAAGCAGCCAGTGGACAAAAGGGCTTTCCTCTGCAAATTGGACCCTCTAATCAAAACAAATGTGTTCTTAAAACATATCATCTTTCAAGTGCAATGATAGATGACTTGAAGAGGAAACACTTTCCCTTGCGGAGAGGTTCTCTTCCATTCTCAACCTTTGAGGTTCTCGCAGCTCACCTTTGGAAGGCAAGGACCAAGGCTTTTGCACTGAGGAAAGAAAAGTTGGTATGCCTACAATTCGCCGTGGACACCAGGAACAGGATGTTACCACCATTACCAAAAGGTTTCAGTGGAAACGCATACGTTCTTGCCTCTGTTATGATGTCAGCAGGGGAACTCGAACAATCAAGCCTTGAAGGCATCATTGAGAAAATAAGAGAAGCAAAGAACACTGTGAATCATGACTATGTGAAAGCCTACATTGAGGCACTGGAAGGACCACAGGGTGCTCTCCCTCCACTGAAAGAGTTAACATTGGTTTCTGATTGGACAAGAATGTCATTTCATAACATTGAGTTCTTTCATGGAAAAGCAGCCTATGCATGTCCTCTGGCCACTCCAATTCCACAGGTTGCATATTTAATGCAGAGTCCTACTGATAATGGAGGCGTTGATGTGAGAATTGGTTTTGAAGCAGAAACCATACCTGCTTTCACTAACTGCTTTTTAAGCAGAGGGTAA 1455 0.4117 MAARHDESDSSSMVSISRIVSVHPKLVQPDHQRVLNLSNLDRQCPTLMHLVFFYNLSSSSSHHQQTLMNDLSLNSVFSSLKSGLEETLNLWYPGAGRLTPNQSDGKLNLWCNNQGAVLVEAETPVKISQLGDLSQYNEFFEKLVYKPAFDGNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYNFLYAWASNSEIMKGRKFDEVPKPVHERGILLSGNHQPPRRTMNFPSNSNLNNVQQARAMAIDHLYQLIMQAASGQKGFPLQIGPSNQNKCVLKTYHLSSAMIDDLKRKHFPLRRGSLPFSTFEVLAAHLWKARTKAFALRKEKLVCLQFAVDTRNRMLPPLPKGFSGNAYVLASVMMSAGELEQSSLEGIIEKIREAKNTVNHDYVKAYIEALEGPQGALPPLKELTLVSDWTRMSFHNIEFFHGKAAYACPLATPIPQVAYLMQSPTDNGGVDVRIGFEAETIPAFTNCFLSRG. 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03224 484 Gene3D - 10 237 IPR023213 -
Seca8g03224 484 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 442 - -
Seca8g03224 484 Pfam Transferase family 28 477 - -
Seca8g03224 484 Gene3D - 267 481 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03224 Seca-Chr8 92168344 92172899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03224 38 476 Monolignol Biosynthesis Gene Families AT5G48930 25.055 1.03e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03224 K15400 - gmx:100803347 743.421