Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g03196 | ATGAAAACGAAACTTCTTCTTTTCATGCTCCTCCTTCTCCTTGTTCTTCACGAACCCATTTGGATCCTTGCCTCATCAGACCCACTTGCTTCCTCCATGCCAGTCCCGGTTTCCTCACCTGAAGTTCCACCCTTTTCTCCAATTCCCACGTCAACAATGGCTGCTTCCTCTCCAGGTATTCTGGTGGGGAGTGAACAGAAACAAATGGATTCACACAAGAAAATGGTAATAGCTTTTGCTGTAGCCAGCACTGCACTTGGTGCTGTCATTTTGTGTGTGTTATGCTTCTGGATTTATTATACCAAGAGTCCTTCAAAACCCAACAGGAAAAACGTTCAAAGCTCAGGCCAAGATGCTGAGAAAGGGCTTGCTTTAGCTCCATTTTTGAGTAAATTCAGCTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTCCCAATAATTGATTACAAGCAATTAGAAAAGGCTACAGGGAATTTCAAGGAAAGTAACATCTTGGGTGAGGGTGGTTTTGGATGTGTCTACAAGGCTCGGTTGGATGATAACTTGGATGTTGCTGTCAAGAAACTGCACTGTGAAAGTCACCATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTGAGTAAAATTCAGCATCCAAATGTAATTTCTCTACTGGGTTGTAGCAGTAATGAGGATACGAGGTTTATTGTTTATGAGTTGATGCAAAATGGATCATTGGAAACTCAGTTACATGGACCTTCTCGTGGCTCAGCATTGACTTGGCACATGAGGATGAAGATTGCTCTTGATACAGCAAGAGGTTTAAAATATCTGCATGAGCACTGTTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACCGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACCTTGGGGTACGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTCTATGCATTTGGAGTTGTGCTTCTGGAGCTTCTATTAGGAAGGAAGCCTGTAGAAAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTTTGGATCCTGTGATTAGGAATACGATGGATCCCAAGCACTTATACCAGGTTGCTGCGGTAGCAGTGCTATGTGTACAACCAGAACCATGTTACCGTCCACTGATTGCAGATGTTCTCCACTCACTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTGCGAGTGTCACAAGTAGTCACACAGCAAGTCTTACATGTTGGTCCGCCTGTGAATTCTAGTCAATGA | 1389 | 0.4334 | MKTKLLLFMLLLLLVLHEPIWILASSDPLASSMPVPVSSPEVPPFSPIPTSTMAASSPGILVGSEQKQMDSHKKMVIAFAVASTALGAVILCVLCFWIYYTKSPSKPNRKNVQSSGQDAEKGLALAPFLSKFSSVKMVGKKGCVPIIDYKQLEKATGNFKESNILGEGGFGCVYKARLDDNLDVAVKKLHCESHHAEREFENEVDLLSKIQHPNVISLLGCSSNEDTRFIVYELMQNGSLETQLHGPSRGSALTWHMRMKIALDTARGLKYLHEHCYPPVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNILDPVIRNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVVTQQVLHVGPPVNSSQ. | 463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g03196 | 462 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 280 | 292 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g03196 | 462 | FunFam | Protein kinase superfamily protein | 126 | 234 | - | - | |
Seca8g03196 | 462 | SUPERFAMILY | Protein kinase-like (PK-like) | 140 | 429 | IPR011009 | - | |
Seca8g03196 | 462 | Gene3D | Transferase(Phosphotransferase) domain 1 | 235 | 434 | - | - | |
Seca8g03196 | 462 | FunFam | probable receptor-like protein kinase At1g80640 | 235 | 434 | - | - | |
Seca8g03196 | 462 | Pfam | Protein tyrosine and serine/threonine kinase | 162 | 391 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g03196 | 462 | ProSitePatterns | Protein kinases ATP-binding region signature. | 165 | 188 | IPR017441 | GO:0005524 | |
Seca8g03196 | 462 | SMART | serkin_6 | 159 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g03196 | 462 | PANTHER | OS01G0750732 PROTEIN | 37 | 433 | - | - | |
Seca8g03196 | 462 | Gene3D | Phosphorylase Kinase; domain 1 | 126 | 234 | - | - | |
Seca8g03196 | 462 | CDD | STKc_IRAK | 165 | 432 | - | - | |
Seca8g03196 | 462 | ProSiteProfiles | Protein kinase domain profile. | 159 | 430 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g03196 | Seca-Chr8 | 91175647 | 91179561 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g03196 | 19 | 375 | Receptor kinase-like Gene Family | AT1G80640 | 47.967 | 3.34e-103 | 310 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Seca8g03196 | PK_Tyr_Ser-Thr | 8.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g03196 | - | - | gmx:100812044 | 746.117 |