Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03181 ATGTGTCCGTCGTTCCTCTGCCGCAGCTACACCCTTTCTCTGTCGTTCCTCCGCCTCTACTTCTTCCTCTGCCGCAACTACTTCTTCCTCTGCGCGCACTTCCCGGGCCATGAAAGGAAGCTTGTGTCGCGCGTCTTTGTCTTTGTCTTTGTGCAAGCTCCCACTGTCGTACGTCCGTCCGTCCAAGCTCGTCGTCCATCCGTCGCAGCTGTTGGAGAGCCTCCGCCATTCCAGGCCTTAGATTACTACCATTCTCAAGGCATAATGCATAAAGATGTCAAGCCCCATAATGTTATGATAGATCATGAATTACGGAAACTTCGCTTGATGATGCTTTTTCAGCAGTATTTAACTGCAAATTTATATTGGTTTATATAG 378 0.4868 MCPSFLCRSYTLSLSFLRLYFFLCRNYFFLCAHFPGHERKLVSRVFVFVFVQAPTVVRPSVQARRPSVAAVGEPPPFQALDYYHSQGIMHKDVKPHNVMIDHELRKLRLMMLFQQYLTANLYWFI. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03181 125 PANTHER CASEIN KINASE II SUBUNIT ALPHA 77 110 IPR045216 GO:0004674|GO:0006468
Seca8g03181 125 Gene3D Transferase(Phosphotransferase) domain 1 78 109 - -
Seca8g03181 125 SUPERFAMILY Protein kinase-like (PK-like) 78 105 IPR011009 -
Seca8g03181 125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03181 Seca-Chr8 90513786 90515941 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Seca8g03181 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03181 K03097 - pmur:107300056 67.0106