Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03129 ATGGGGAAACATTGGTCTTTCTTCCATGTTTTGGATACCCTTTGGTTGTGTATCCTCCTTTTGTCTGAAGTGGTTTTGGCTGGTATTCTATGGGTTGGCAAGGTCCCTCCAGGATTTGAAGGGTCTCAAATGAATTGGATTGACAGGAATGGCAAGTTCCTTGTGTCAAATAATGGAGAATTTGGCTTTGGCTTTGTCACCACTGCAGATGACAGCACATTGTTTCTACTGGCAGTGGTCCACATGGACAGTACCAAGGTGGTTTGGGTTGCAAATAGAGCACTTCCTGTTTCCAACTCTGATAAATTTGTGTTTGATAAGAAGGGTGATGTCTTTTTACAGAAAGGAGGAGCTGTTGTCTGGTCTACAGGTACAAGTGGAAAAGGAGTTTCTTTAATGGAATTGCAGGACACTGGAAATTTGGTTTTGCTTGGGAATGATAGTAGAATGATTTGGCAGAGTTTCAGCCATCCAACAGATACCTTGTTGCCAATGCAGGATTTCAAGGAGGGAATGAAACTTATAAGTGAACCTGATTCTAACAACTTGACCTATGTCCTTGAGATTGAATCTGGCAATGTTATTCTTTCCTCAGGTGTACAAACACCACAGCTTTATTGGTCTATGCAAAAGGATAGCCGCAAAATCATCAATAAAAATGGTGATGTGGTAGCTTCAGCAACCCTTAGTGCAAATTCTTGGAGATTCTATGACAAAAATAAATCCTTGTTGTGGCAATTTATTTTTACTGAAGATTCAGCTGCAAATGCTACTTGGATTGCAGTTTTGGGAAGTGATGGTTTTATTACTTTCTCCAATCTCCAAAGTAGAGGGACAATTGGTGCCTCACCAACAAGAATACCACAAGGTTCTTGTAGTACTCCAGAACCTTGTGGTCCTTATAACATATGCACTGGTGACAAAAAGTGCAGTTGCCCTTCTATTCTTAGCTCTAGTCCTAATTGCAAACCAGGGTTTGTCTCTCCTTGTAACTCCAAAAACTCCATTGAGCTCCTGAAAGCTGATGATGGACTTGATTATTTTGCACTTGGGTTTCTTACACCCTCTTCAAAAACTGATTTGATTGGTTGCAAAAGTTCTTGCAGTAAAAACTGCTCATGCCTTGGTATGTTCTTTCACAACAGTTCAGGGAACTGCTTCCTGTTGGACAGGATTGGAAGCTTTGAGAAATCTGATAAGGATTCTGGTTTTGTCTCTTACATTAAGGTCTCTAATGATGGCACAGGCACAGGAGACAGTGGAAACAGCAAAATGCAGACCATAATAGTTGTGATCATTGTAATAGTAACATTGCTTGTCATTTCTGGTATGCTCTTTGTGGGGTTTAGATGCTTCAAGAAAGAGGAAAACATGCCTGAGTCTCCCCAAGAGCATTCAGAAGAGGACAATTTATTGGAGAATTTAACTGGCATGCCAATCCGTTACAGCTACAATGATCTAGAAACTGCAACAAATAACTTCTCTGTGAAGCTTGGGCAAGGGGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGCATTGGTCAAGGGAAGAAAGAGTTTAGAGTTGAAGTTAGCATTATTGGCAGCATTCATCACCACCATTTGGTTAGGCTTAAAGGATTCTGTGCTGAAGGATCACACAAGCTTCTTGCTTATGAGTATATGGCCAATGGCTCATTGGATAAATGGATATTCAAGAAAAACAAAAGAGAGTTTCTGTTGAATTGGGATACAAGGTTTAATATAGCACTAGGAACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCAAAGATTGTTCACTGTGATATCAAACCAGAAAATGTGCTTCTAGATGATCATTTCCAAGCCAAAGTTTCAGATTTTGGTCTAGCTAAGCTCATGACACGTGAACAAAGCCATGTTTTCACTACACTAAGGGGAACAAGGGGCTATCTTGCACCAGAGTGGATCACAAACTATGCTATATCAGAGAAAAGCGATGTTTATAGCTATGGAATGGTGTTGCTAGAGATCATTGGAGGAAGGAAAAACTATGATCCTGCTGAAACTTCAGAGAAATCCCATTTCCCATCTTATGCTTTTAAGATGATGGAAGAAGGGAAAGTGAAAGATGTTCTTGATTCAGAGTTGAAAACATATGAAAATGATGAGAGGGTTCACATTGCTATCAAAGTTGCATTATGGTGCATACAAGAAGACATGTCTCTGAGGCCTTCTATGACCAAAGTTGTCCAAATGCTTGAGGGTCTATGCACAGTTCCAAAGCCACCAACTTGTTCTCCATTGGGATTTCGCCTTTACTCAAGTTTACTCAAACCCACAAGTGATAGTGGCACTTCTTCTTCAGGACCACCAGATTGTAACAGTGATGCCTATCTCTCTGCTGTTCGGCTTTCAGGGCCAAGATAA 2454 0.4067 MGKHWSFFHVLDTLWLCILLLSEVVLAGILWVGKVPPGFEGSQMNWIDRNGKFLVSNNGEFGFGFVTTADDSTLFLLAVVHMDSTKVVWVANRALPVSNSDKFVFDKKGDVFLQKGGAVVWSTGTSGKGVSLMELQDTGNLVLLGNDSRMIWQSFSHPTDTLLPMQDFKEGMKLISEPDSNNLTYVLEIESGNVILSSGVQTPQLYWSMQKDSRKIINKNGDVVASATLSANSWRFYDKNKSLLWQFIFTEDSAANATWIAVLGSDGFITFSNLQSRGTIGASPTRIPQGSCSTPEPCGPYNICTGDKKCSCPSILSSSPNCKPGFVSPCNSKNSIELLKADDGLDYFALGFLTPSSKTDLIGCKSSCSKNCSCLGMFFHNSSGNCFLLDRIGSFEKSDKDSGFVSYIKVSNDGTGTGDSGNSKMQTIIVVIIVIVTLLVISGMLFVGFRCFKKEENMPESPQEHSEEDNLLENLTGMPIRYSYNDLETATNNFSVKLGQGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHKLLAYEYMANGSLDKWIFKKNKREFLLNWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFQAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPAETSEKSHFPSYAFKMMEEGKVKDVLDSELKTYENDERVHIAIKVALWCIQEDMSLRPSMTKVVQMLEGLCTVPKPPTCSPLGFRLYSSLLKPTSDSGTSSSGPPDCNSDAYLSAVRLSGPR. 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03129 817 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Seca8g03129 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 209 IPR036426 -
Seca8g03129 817 SUPERFAMILY Protein kinase-like (PK-like) 474 763 IPR011009 -
Seca8g03129 817 PIRSF SRK 9 812 IPR024171 GO:0004674
Seca8g03129 817 FunFam serine/threonine-protein kinase PBS1-like 460 566 - -
Seca8g03129 817 ProSiteProfiles Bulb-type lectin domain profile. 39 156 IPR001480 -
Seca8g03129 817 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Seca8g03129 817 FunFam S-receptor-like kinase 5 567 771 - -
Seca8g03129 817 Pfam D-mannose binding lectin 87 168 IPR001480 -
Seca8g03129 817 SMART serkin_6 492 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g03129 817 FunFam Serine/threonine-protein kinase 41 156 - -
Seca8g03129 817 CDD B_lectin 47 158 IPR001480 -
Seca8g03129 817 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 774 - -
Seca8g03129 817 Gene3D - 45 157 IPR036426 -
Seca8g03129 817 CDD STKc_IRAK 498 765 - -
Seca8g03129 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Seca8g03129 817 Pfam Protein kinase domain 496 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g03129 817 SMART blect_4 45 158 IPR001480 -
Seca8g03129 817 Gene3D Phosphorylase Kinase; domain 1 455 566 - -
Seca8g03129 817 ProSiteProfiles Protein kinase domain profile. 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03129 Seca-Chr8 88898993 88901446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03129 439 772 Receptor kinase-like Gene Family AT5G20050 44.225 1.75e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca8g03129 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03129 - - gmx:100787500 1332.39