Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03125 ATGTCTGGAGAAGTCATTGCTACTCCATCAGCTGCTTCTTTTGATTATGAGATCTTGGACAGTGATCCTGACATCGTTAGAACTGTTAGGGCCTCATCCAATCAAGCAAATCCATGGATTGAACCTGAAAGATTGAAACTTAGACACAGAATTGGTCGGGGGCCCTTTGGTGATGTTTGGCTAGCAACACATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAAGAACATGTGAAGATTGTATTGGAGAAATTCAATGACTTATTCTATAAGTGCCAAGGAGTCGCTAGCGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATCTGCATCATTATGAATTTGTATGAAGGTTCAATTGGTGACAAGATGGCTAGACTCAGAGAAGGGTGGATTTCATTGCATGATGTTTTGAGGTATGGAATCAACCTAGCTCAAGCTATTCTGGAACTTCACTCCAAAGGGATCCTCATTCTCAACCTTAAACCATTCAATGTTCTTCTCAATGATAATGATCAAGCAGTTTTGGGAGATGTTGGTATTCCCAGTCTTTTGCTTGGCTCCTCCTTCGTTAGCTCAGATATGGCTCAGAGGCTTGGAACTCCAAACTACATGGCCCCAGAACAATGGGAACCAGAGGTCAGAGGCCCTATATCCTTGGAAACAGATTCATGGGGATTTGGATGCACCATTGTTGAAATGTTGACTGGCAATCAACCTTGGTATGGATATCCTGTTGGTGCAATATACCAATCGGTTGTTGAAAAGCATGAAAAACCCCATATTCCAAGTGGCCTTCCTTCTTCAATTGAGAATATCCTTAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTCAATGGTGGAAATTCTGAATGTCTTTAAAAGCTCGCTGAGTGATCTGGCCAATGATGGAGGATGGGGATATCTAGGAAATGTGAAAGTTATTGCAAAATCAGGTAGCACTGACTACACAGAGTGGTTCCTGTCAAAGGATCATCTGCAGGTGGGTGACATGGTCCGATCTAGAAAGCCTCCCAATTCATGCAAAGCTCAAAACATGGATGTCCCAGAAGGAACTATTGTTGGTTTAGAACGTAATGCAGACCATGGGTTTGTTCTTGTGAGGGTCCATGGTATTCATGACCCTTTAAGAATTCATGTGTCAACTCTTGAACGTGTCACATTTGGCTTGGCAGCTGGTGATTGGGTACGCTTAAAGGATGAAAATGAGAAGCACTCTCCAGTGGGCATTCTACATTCCATCAATCGTAATGATGGTAGAGTGGCTGTTGCATTTATTGGGATGCAAACTCTTTGGACTGGAAATTCTTCAGAACTTGAAATGGCAGAATCATTCTGTGTGGGCCAATTTGTTAAGCTGAAAGACAATGTTTTAAGTCCTCGATTTGAATGGCGTCGCAAAAGGGGAGGATCCTGGGCTACTGGTAGGATTTCATGGATCCTACCAAATGGGTGTTTGATTGTCAAGTTCCCAGGGATGCTGACTTTTGGGAATGAATCTAGCACCTTCTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGATTTTAACACTTGTCCTGGGATGATAGAAAAGTATCAACATGTAGAGGATCATCACTGGGCAGTTAGACCTGTTCTAATTGTATTCGGACTATTTACAGCTCTCAAACTAGGCATATTAGTTGGAAAGAAAGTGAGGAGGAACGTGAAGGTCAATGCAATAGAAAGCAAAACTCAATATCTTGATGGTCAAAATGCCAGCAAATCTTCCAATGCTGTTAGTCCTAGCAACACAGCATGGGTTCCTTCAGTTGCCAATATCCTTTTTAAAGAAGGTGTTAACACTTCCACTGGTCGGTAG 1908 0.4224 MSGEVIATPSAASFDYEILDSDPDIVRTVRASSNQANPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLYPIREEHVKIVLEKFNDLFYKCQGVASVCWLHGISIINGRICIIMNLYEGSIGDKMARLREGWISLHDVLRYGINLAQAILELHSKGILILNLKPFNVLLNDNDQAVLGDVGIPSLLLGSSFVSSDMAQRLGTPNYMAPEQWEPEVRGPISLETDSWGFGCTIVEMLTGNQPWYGYPVGAIYQSVVEKHEKPHIPSGLPSSIENILSGCFEYDLRNRPSMVEILNVFKSSLSDLANDGGWGYLGNVKVIAKSGSTDYTEWFLSKDHLQVGDMVRSRKPPNSCKAQNMDVPEGTIVGLERNADHGFVLVRVHGIHDPLRIHVSTLERVTFGLAAGDWVRLKDENEKHSPVGILHSINRNDGRVAVAFIGMQTLWTGNSSELEMAESFCVGQFVKLKDNVLSPRFEWRRKRGGSWATGRISWILPNGCLIVKFPGMLTFGNESSTFLADPSEVEVVDFNTCPGMIEKYQHVEDHHWAVRPVLIVFGLFTALKLGILVGKKVRRNVKVNAIESKTQYLDGQNASKSSNAVSPSNTAWVPSVANILFKEGVNTSTGR. 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03125 635 Gene3D Transferase(Phosphotransferase) domain 1 131 319 - -
Seca8g03125 635 CDD STKc_PknB_like 46 311 - -
Seca8g03125 635 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
Seca8g03125 635 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g03125 635 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Seca8g03125 635 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Seca8g03125 635 PANTHER OS06G0639500 PROTEIN 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03125 Seca-Chr8 88657955 88663956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03125 51 307 MAP Kinase Kinase Kinase AT1G05100 27.660 6.27e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Seca8g03125 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03125 - - gsj:114393396 1068.53