Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03118 ATGCAGCCACAAATTTTGGTTAATGTAACACAATTTTTAAATTCAGATTATGTTGCCCTCGAACATGCTTTGAGTAAAGAAAGGGTGAGCAGCAGTGTTGAAAGAGGGTCAGATAGCACAATGAACAAAAAACCGGAAATGGTGGCAAGCAGGAGAGATTTATTACAAACAGAGGTGTATAATCTACAGCACCTCTCACCTCTAACGCCATCGTTGCAGTGCTCTGACCAAGGCAAGGAGGCTGCACAATCCAAACTCATTTCTGGAAATTATCTACCATCTCCTGAATCTGATGTGAATGTGCTCTCATCTGATGCAAATTACACTAAATCATCAGAAAACTTACACAGCAGTCTTACCCATCTGCAAACGAATGAGATGTTGGGAACTTCCTCCTATCATTCTGAAATGGATTGCAACAATGTGAACGTCCAGGATCCATCATCACCACCATGCGATTCAGTGCCAATAGGTAAAGCTTCATCGTTCTCATCTAAAGCAAATGAGTGGAAAAGTGTTCCAGATAGCAAGTTAGTCTTCCATGGATGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGTAGTTCCCCTATTACCCCAAAGACTAACGTAGGTGAAACACAATATTTACCGTGTCTTGAATCAGATAGCAAGCTCTTCGACATTCTAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCCCCGATCCAAAAGCGGGTTTCTCCTCCCCCGAGTCATGTACGTGGGATTGGGTCAAGCTCCTCAGGAGGCTTGAGAAGTGGCAGGAGATTTGTATTGAGATCTGTACCTTCTTTCCCACCACTGACCCCTTGCGTTGATTCCAAAGGCAATGGCACTGAGGATTCGGGTAACAATGCCAGCAAGTGA 924 0.4394 MQPQILVNVTQFLNSDYVALEHALSKERVSSSVERGSDSTMNKKPEMVASRRDLLQTEVYNLQHLSPLTPSLQCSDQGKEAAQSKLISGNYLPSPESDVNVLSSDANYTKSSENLHSSLTHLQTNEMLGTSSYHSEMDCNNVNVQDPSSPPCDSVPIGKASSFSSKANEWKSVPDSKLVFHGCIRQLSGGSLRWRSSPITPKTNVGETQYLPCLESDSKLFDILEDETPDVLKEASTPIKSVKANSPIQKRVSPPPSHVRGIGSSSSGGLRSGRRFVLRSVPSFPPLTPCVDSKGNGTEDSGNNASK. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03118 307 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 33 294 IPR044522 GO:0003700
Seca8g03118 307 MobiDBLite consensus disorder prediction 242 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03118 Seca-Chr8 88478871 88480417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03118 220 289 CPP Transcription Factor Family AT3G22780 42.857 3.48e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03118 K21776 - gmx:547664 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03118 8 88478871 88480417 Seca8g03118 8 88478871 88480417 ECH
Seca8g03118 8 88478871 88480417 Seca4g02057 4 35017843 35019727 PCT