Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03114 AAACTTTCTAATGGGTGGAGACCAAAAAGGACAACTATAGAATTGCATTATGAAAATTCATCACAAGTTTTGAAACAATTTAAGGTTGAAAGTCGCTATATTATTTGTTCAATTGAGATAATCAAAGAGTCAAGAAAGTATATTCAGGTTTTGAAGATATGGGACATATTGCCTCTAAAGGATATCCCACAATTGGCTAAGCGCCTTGATAACACATTCAGAAGATACACTGATGAATATATCATTCGATGCAAACAAAAAGGTTTTGAGGGAAACATTGAGTTTCCTTTGAGTTGGCCTATCTCTTCAAATACCCAAAAATTTAAGAGTGTTGATAATACAAATGAGGGAGTTTTAGATAAATATGAAGATATAATTGATGCTGAAAACTCAAAGGTTGAGGAGAGTATATTGTTGATGAAGTACTGTTCCTTTTCAATAAGTTATGTGTTTTCTGGCCATGATGCTTTAGAAGTGGATCTGCGCATATTAAAAAAAAGTTCTCCGTGCTTCTGGATCCGAACCCAAATAACAATTTCTAAGATCATGGACTCGTCTTGGTTCAAGAAACCGGTGTCGAATAGCATGATGACGGCGAGGAGGAAAGAGGAAGAGGCATTTGATTTTGAGGAGAAGTCGAATGTGCCAATGACAATGAACACGTTTCAAATAATTTCGCTATCAGAAGAGTTTGATTTGTCGCCGTTGTTTGAGAAGAAGAGAATTGCGAGTGATGGAAGTGGGGGACAATGGGGTTGGGTGAGTTACATGGGGTGGGGAGAAAAGGGAGGGGGAAATATTGGTGGGGGAGGTTGTGGCGGTCTTAAGGATAACTTTTGGCGGTTTAAGACGCCAGAAATATAA 864 0.3808 KLSNGWRPKRTTIELHYENSSQVLKQFKVESRYIICSIEIIKESRKYIQVLKIWDILPLKDIPQLAKRLDNTFRRYTDEYIIRCKQKGFEGNIEFPLSWPISSNTQKFKSVDNTNEGVLDKYEDIIDAENSKVEESILLMKYCSFSISYVFSGHDALEVDLRILKKSSPCFWIRTQITISKIMDSSWFKKPVSNSMMTARRKEEEAFDFEEKSNVPMTMNTFQIISLSEEFDLSPLFEKKRIASDGSGGQWGWVSYMGWGEKGGGNIGGGGCGGLKDNFWRFKTPEI. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03114 287 PANTHER MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 1 161 IPR039904 -
Seca8g03114 287 Pfam NAF domain 216 245 IPR004041 GO:0007165
Seca8g03114 287 Gene3D Kinase associated domain 1, KA1 214 248 - -
Seca8g03114 287 ProSiteProfiles NAF domain profile. 214 238 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03114 Seca-Chr8 88399665 88400626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03114 175 237 CBL-interacting serine-threonine protein kinases AT4G30960 46.575 2.13e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03114 - - ccaj:109788813 210.305