Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03104 ATGGGACCATTTAGCGGAATAGCTCAAGATGTCAAAGGTAGAGCTAAATGCTATAAACATGATTGGATTGGTGCATGCTGTTCTGGCATAAGGATATTGGCTCCAACTTTCTACATATTCTTCGCTTCTGCTCTCCCTGTTGTTGCTTTTGGGGAGCAACTTAGTAGAGATACAGATGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGTCAGCCTTTGTTGATTTTAGGAGTTGCTGAACCTACTGTTATAATGTACACTATTCTGTATGAGTTCTGCATAAAAAGGCCTGAACTAGGTGCCAAGCTTTTTCTGCCTTGGGCTGCTTGGGTTTGTGTCTGGACAGCACTCTTGTTGATTCTGCTTGCAGTATTTAACGCGTGTGCAGTTATCACTAGGTTCACAAGAATTGCAGAGGAATTATTTGGAATGCTAATTACGGTCCTTTTCTTTCAGCAGGCTATAAAGGGACTCATAAGTGAGTTCAACATACCCAAGGCTGAAAATCCGTTGTTAGAGGAATATCAATTTCAATGGCGGTATACAAATGGATTACTTGCAATCATTTTCTCTTTTGGGTTACTTTTCACTGCCTTTATAAGCAGGAGAGCAAGATCATGGCGATATGGAGCAGGGTGGCTACGGGGTTTCATTGCAGATTATGGGGTTCCCATGATGGTGGTCTTTTGGACAGCACTATCTTATACTGTACCAAGTAAAGTTCCAACTGGTGTTCCCAGAAGGCTGTTTTGTCCACTTCCCTGGGAATCTGCCTCTCTTTACCATTGGACAGTAGTGAAGGATATGATGAAGGTACCCTTGCCATATATCTTTGGGGCATTTATTCCAGCTCTGATGGTAGCAGGTTTATACTTTTTTGATCACAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAACCATCTGCCTACCACTATGATATTTTCCTGCTTGGAATAATGACTCTGATTTGCGGTATTCTTGGCCTTCCTCCAGCAAATGGAGTCCTTCCTCAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGAATATCAACTCAAATACATTCATACATTACTATATCAATTTACAGTTGATACGAAAGAAGGTGGTGAAAAGTGCCAAGGAATGCATTAAGCAACAAGGGAGCAACTCTGAATTATATGGAAAGATGCAAGCTGTGTTTCTAGAAATGGATACAGCACCTACTGATAAAGAGTTGGAGACTTTGAAAAAGGCTGTGATGAAATCTAATGAGAAGGATGGTGCAAAGGAAAATTTTGATCCTGATAAACACATTGATGCTTATCTACCTGTCAGGGTAAATGAGCAAAGAATGAGCAACTTATTGCAGTCTCTCCTGGTTGCCCTATCACTTCTAGCCATCTCTGTCATCAAAAGGATACCTACTTCAGTTCTATGGGGATATTTTGCGTACATGGCAATTGATAGTCTTCCAGGGAATCAATTCTGGGAAAGGATATTACTTCTCTTCATCCCCCCAAGCCGGCACTACAAAATTTTGGAAAGTTCTCATGCTTCATTTGTGGAGTCAGTACCATTCAAGAGCATAGCTGCATTTACAGTTTTACAATTTGTATACTTTGTGATCTGTTACGGAGTGACATGGATACCTACAGGCGCAATCCTGTTCCCACTACCTTTCTTCTTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGCTTTTCAAGCCTAACCATCTTCAGGAACTTGATGCTGCTGAGTACGAGGAAATTGCTGGTGCTCCACATGCAACTCATAATATATCACTAAGGGACAAGGAGACAGGTGATAACGACAGTGATAAGAGCTCAGAGGATTATTATGATGCAGAAATATTGGATGAGATGACAACCCACAGGGGAGAGTTGAAACTTAGAACTGTAAGCCAAAATGATAGTAGAAGTTTCAGCCGCAGCTTCAGTTACAGCTTCAGTGAAGACAGGCAGTGTCAGGTTCACCCTGAAGAAGCAAACCGGATGTGA 2070 0.415 MGPFSGIAQDVKGRAKCYKHDWIGACCSGIRILAPTFYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCIKRPELGAKLFLPWAAWVCVWTALLLILLAVFNACAVITRFTRIAEELFGMLITVLFFQQAIKGLISEFNIPKAENPLLEEYQFQWRYTNGLLAIIFSFGLLFTAFISRRARSWRYGAGWLRGFIADYGVPMMVVFWTALSYTVPSKVPTGVPRRLFCPLPWESASLYHWTVVKDMMKVPLPYIFGAFIPALMVAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDIFLLGIMTLICGILGLPPANGVLPQSPMHTKSLAVLRRQNINSNTFIHYYINLQLIRKKVVKSAKECIKQQGSNSELYGKMQAVFLEMDTAPTDKELETLKKAVMKSNEKDGAKENFDPDKHIDAYLPVRVNEQRMSNLLQSLLVALSLLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIPPSRHYKILESSHASFVESVPFKSIAAFTVLQFVYFVICYGVTWIPTGAILFPLPFFFLITIREHLLPKLFKPNHLQELDAAEYEEIAGAPHATHNISLRDKETGDNDSDKSSEDYYDAEILDEMTTHRGELKLRTVSQNDSRSFSRSFSYSFSEDRQCQVHPEEANRM. 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03104 689 PANTHER ANION EXCHANGE PROTEIN 3 608 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca8g03104 689 Pfam HCO3- transporter family 189 370 IPR011531 GO:0006820|GO:0016020
Seca8g03104 689 Pfam HCO3- transporter family 460 551 IPR011531 GO:0006820|GO:0016020
Seca8g03104 689 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016020
Seca8g03104 689 Gene3D Helical hairpin bin 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03104 Seca-Chr8 88023767 88029688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03104 2 658 Antiporters AT5G25430 67.221 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03104 K24194 - gmx:100808880 1076.62