Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03099 ATGGATACTGGGTTAGAAAATATCTTTGGTGAGCATGTAGAACATCCTAATTCAGAGGATCATGTAGAAGAATTAATTTCAAAGGATCAAGTACAAGAAAATATGCCAGAGGCAGAGGTTCGCAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTATATTTTTCATATGCCAAATGTCATGGCTTTGCTATGAGGAAAGATGATGTAATTCGGGATGTGAAAGGCAATGTTATTATGCGTCAGTATTTATGTAGCAAAGCTGGGTTGAGGGACAAAAAGCACTTTTTGAGGGTAGATCGTAAAAAAGATCATAGGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTGCGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCGGAAAAATTTGTCCCTTTAATTCCTTCATATCGTGGCTTGTCTAAAGGTGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACTTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGATGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGGAAAGCAGACAATGAACCAGTTTTTTCTCTAGGTTTTGTATGTTCTGATGATGGTAAATTGACCCACCTATTTTGGGTCGATGGAATTAGTCGTGCTGATTATCAATTTTTTGGAGATGTGGTTGGGTTTGATGCCACATACAAGAAGAACAAATATAGGTATCCGTTGGTTATATTTTCTGGTAAAAATCACCATTCTCAAACAATTATATTCGCTTGTGCTATAATTGCAGACGAGACCATTCAAACATATAAGTGGGTTCTTGAAATGTTTTGGAAATGTATGTTTAACAAGCATCCAAGTGCAGTAGCGACTGATGGTGATGGTGCCATGAGGGAGGCCATTAGGCAAGTATTTCCAAATGCATCTCACCGACTGTGTGCGTGGAACTTGAACAAGAATGCATGTGAAAATGTGAAGAATGCTAAATTTTTGGATGATTTCAAGAAAGCTATGTACAGTAATTTCACTGCAGAGCAATTTGAAGAGTTTTGGCACGAAATGGTTTCCAAACATAGTCTTCAAAATAACAGTTGGATTTTAAAGACTTATGACAAAAAGGAAATGTGGGCTACTGCATATTTGCGTGACAAGTTTTTTGGACGTATAAGGACTACTTCGTAA 1332 0.3694 MDTGLENIFGEHVEHPNSEDHVEELISKDQVQENMPEAEVRRIIDLSSKDIKGLEFGSEEDAYNLYFSYAKCHGFAMRKDDVIRDVKGNVIMRQYLCSKAGLRDKKHFLRVDRKKDHRPLTRVNCEAKLRVRYDYKTGKFKVVSFIECHNHELTPEKFVPLIPSYRGLSKGDKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVMRGKIKDGDAMAALSYLQGKADNEPVFSLGFVCSDDGKLTHLFWVDGISRADYQFFGDVVGFDATYKKNKYRYPLVIFSGKNHHSQTIIFACAIIADETIQTYKWVLEMFWKCMFNKHPSAVATDGDGAMREAIRQVFPNASHRLCAWNLNKNACENVKNAKFLDDFKKAMYSNFTAEQFEEFWHEMVSKHSLQNNSWILKTYDKKEMWATAYLRDKFFGRIRTTS. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03099 443 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
Seca8g03099 443 PANTHER OS01G0519700 PROTEIN 50 424 - -
Seca8g03099 443 Pfam MULE transposase domain 276 370 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03099 Seca-Chr8 87950751 87952082 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03099 MULE 2.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03099 - - ccaj:109792835 565.844