Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03096 ATGGTTACAACAGGTGGTACAAGCCTGAAAGATGATATTATGCGATTATATCAACTGGTTCATTTGCTAGTTGGAACTCCAGGAAGAATATTAGAACTTGCAAAGAAGGGTGTTTGCATTCTGAAAAATCGTTCTATGCTTGTTATGGATGAGGTAATCACAGTAAACATAAAATTCTCTGGTTGTTGA 189 0.3598 MVTTGGTSLKDDIMRLYQLVHLLVGTPGRILELAKKGVCILKNRSMLVMDEVITVNIKFSGC. 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03096 62 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 52 - -
Seca8g03096 62 Pfam DEAD/DEAH box helicase 3 52 IPR011545 GO:0003676|GO:0005524
Seca8g03096 62 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 52 IPR027417 -
Seca8g03096 62 Gene3D - 1 54 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03096 Seca-Chr8 87914382 87914570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03096 5 51 Eukaryotic Initiation Factors Gene Family AT3G13920 42.553 4.08e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03096 K12614 - thj:104817022 93.9745