Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03036 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACGTAATGGAGATGGAAACCCGGTGGGAGACCAAGCTGGGTTGTCATGGGGCAGGAGGATGATACATGAACTAACACATTATGACATTAGACGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAATATGATATTGAGCGAAATGAGAATGGTTATATTGTTAATCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAGGGAGGCGAGGCCAATTACTCCTGTGCAGTGCACAGCAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAATTCCTCCAACGTATGTTCACATGATGCCAGCTTATAGACGATTGAGTGAATATGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACAGTGATCCACTAATGCATTGCATGTTCAGGACAACAAACGATGGCAGACTGCAGGACCTATTTTGGTGTGATGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACACGACTTATAAGAAGAACAAATATAACAAGCCTTTGGTTATTTTTTGCGGGTACAACCACCATGGGGAGACATGTATATTTGGTTGTGCACTTGTTGCTGATGAGAAAATTGAGACTTACAAGTGGGTTCTCGAGACGTTTTTGGAAGCAATGTTTGGCAAAGAGCCCAGTGCCGTAGTTACAGATGGAGATGCAACAATGCGAGAAGCTATCAGGGTTGTATTCCCAAGTGCAGTTCACAGACTTTGTTCATGGCACATACACCAAAATGCCTGTGAGAATGTGAAGAATTCAAAATTTCTAGAGGAATTCAAGCGCATGATTTATGGAAAATTCACGGAGGATAGATTTGAAAGGGAGTGGACAAACATGGTTGATAAATTTGGATTATCTAACAACAGGTGGGTCCAGAAAATGTATGACATGAAGAGGTTATGGGAAAATTCATATATGGGAGACACATTTTATGGTGGTATTAGAACAACGTTTGTGTGTGAGGGAATTAATTCGTTCATTAAGAGGTATGTCCAAAATAGGAACAGCCTGGTGGACTTCCTTCACAACTTTGACAGGGCGTTAAAGGAGTACAGGCACAATGAATTGATTTCTGATTTTAAGTCATTTTACAGAGAACCTGTATTGACCACAACTCTTTTTACCATTGAGGAATATGCCTCCAAAGTGTTCACTAGGAAAAAGTTTTGGGAAGTTAAGTCTGAGATTGAGAGTGCGACTGCGTACAATGTAGTGGATAGGGTTGTGACTGGTGAGACTGTGAGGTTGACAATGAATAAGTTTTGCAAACCGGATTATAAGTATGATGTTGTATTAGATAAAAGTGAATTGAAGTTCAATTGTGAGTGTAGAATGTTTGAGTCATGTGGCATTCCCTGCCGTCACATTTTTTGTGCAATGAAGAATGAGCACGTGAAAACCATTCCAAGTAGCCTAATACTGAAGCGATGGACAAAATCAACGAAGCCTGATTTCATGTCCATGAGCCCGTTGTGA 1866 0.4078 MEFNKDFMDGCSTFWTDENSESNRDESRNGDGNPVGDQAGLSWGRRMIHELTHYDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKYDIERNENGYIVNRYLVCNKEGTRDKKHLERKDRVREARPITPVQCTARMRVYLDMRSGKWKVSAFHDDHNHELIPPTYVHMMPAYRRLSEYDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGDAFAALCYLQGKYNSDPLMHCMFRTTNDGRLQDLFWCDGASRVDYQCFGDVIAFDTTYKKNKYNKPLVIFCGYNHHGETCIFGCALVADEKIETYKWVLETFLEAMFGKEPSAVVTDGDATMREAIRVVFPSAVHRLCSWHIHQNACENVKNSKFLEEFKRMIYGKFTEDRFEREWTNMVDKFGLSNNRWVQKMYDMKRLWENSYMGDTFYGGIRTTFVCEGINSFIKRYVQNRNSLVDFLHNFDRALKEYRHNELISDFKSFYREPVLTTTLFTIEEYASKVFTRKKFWEVKSEIESATAYNVVDRVVTGETVRLTMNKFCKPDYKYDVVLDKSELKFNCECRMFESCGIPCRHIFCAMKNEHVKTIPSSLILKRWTKSTKPDFMSMSPL. 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03036 621 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Seca8g03036 621 ProSiteProfiles Zinc finger SWIM-type profile. 556 594 IPR007527 GO:0008270
Seca8g03036 621 PANTHER OS01G0519700 PROTEIN 58 616 - -
Seca8g03036 621 MobiDBLite consensus disorder prediction 14 39 - -
Seca8g03036 621 Pfam MULE transposase domain 281 375 IPR018289 -
Seca8g03036 621 Pfam SWIM zinc finger 558 586 IPR007527 GO:0008270
Seca8g03036 621 SMART 26again6 569 596 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03036 Seca-Chr8 84824302 84826167 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03036 MULE 4.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03036 - - tpra:123910662 691.804