Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03001 ATGGAGGGTAATGTGGACTGTGTAAGCAATAGAGTTAGTGGATTAGAAGATAGTGTAGAATTCGCAGAAGATGAATTTTCAAAAGGGACCAATTTTGAAGGGTTTTGTTTTGATAGTGAAAATGATTTTGTGAAAGTAGACCCTGCTGTGCTTAGTACTGATCTCATTAAGACATTTACTTTCTCGAATTTGGAAGTAGCATATGAGTTTTATAACTGGTATGGAAGGATTAAAGGGTTTTCTGCTAGAAGGGGAAAAGTTCGAAAGAATAGGGATCAAGAAATTGTAGAGAAGACTTTATTTTGTCACAGGGAAGGAAAAAGGACGAAAAAAGATGATAATGAAGAAGAGCCCATTGTGCGTGAACCAAGACCCGAGACAAGAACAGGATGTCGTGCTAAAATGAAGGTGCGTATTGATGTTGTTAGTGGGAGGTGGCGCGTTTCTAAGTTTCATGAAGAACACAACCACAAGCTGTTGGGAGCAATACACACTGGAATGTTGCCTGCTCATAGGAAAATGACCGATGCTGACATTATGCAAATGAATAGTTTGTGCAATGTTGGTATAAGCACACCCCATATATTTGGCTCATTTGCAAGTCAGTCTGGTGGTTTTCAACATGTTGGATTTTCTAAAAAAGACATGTATAATGAAATAGGTAGACAAAGGATGTTGCAGTCATCTGATGTTAAGGGTGCATTTCAATACCTTCGTGACATGGCATCTTCTAGTGGACCTATGTATTGGAGCCACACCCTTGATAGTGATGGTAGATTAATGTGTTTATTTTGGTGTGATGGGCATAGTCAACTAGATTACAAAGTATTTGGAGATATGTTAGCATTTGATGCCACTTACAAAAAAGAATAA 873 0.3814 MEGNVDCVSNRVSGLEDSVEFAEDEFSKGTNFEGFCFDSENDFVKVDPAVLSTDLIKTFTFSNLEVAYEFYNWYGRIKGFSARRGKVRKNRDQEIVEKTLFCHREGKRTKKDDNEEEPIVREPRPETRTGCRAKMKVRIDVVSGRWRVSKFHEEHNHKLLGAIHTGMLPAHRKMTDADIMQMNSLCNVGISTPHIFGSFASQSGGFQHVGFSKKDMYNEIGRQRMLQSSDVKGAFQYLRDMASSSGPMYWSHTLDSDGRLMCLFWCDGHSQLDYKVFGDMLAFDATYKKE. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03001 290 MobiDBLite consensus disorder prediction 107 128 - -
Seca8g03001 290 Coils Coil 5 25 - -
Seca8g03001 290 PANTHER OS01G0519700 PROTEIN 57 283 - -
Seca8g03001 290 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03001 Seca-Chr8 83898851 83900337 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03001 FAR1 4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03001 - - mtr:112420123 251.136