Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02978 ATGATGAATATGGACGACGATTTGGCAGGGGAGTTTGATAGCGTGTTCGTCTGCGTTTTGCTGATGTTTCACCTATTTGGGCTCGGCATGGTGGTTTACACGCAACTCAAGCGAGGGAGCGCGATGGTGTCGATGGGGAGGTTCGAGTTGGAGGCATTTTTGAAGGCAATTGAGAAGCATAGGGTGACGAATATGTGGTCGTTGCCTCCCATAATGCTTGCTCAGGCAAAACAGAGTGTGGTTAGCAAGTACGATCTTTCATCGTTGAAGTATATTGGGCTTAGTGTTGCTCCTCTTGTGAAAGAGTTGATGGAGGAGTGTGCTAGGCGTTTGCCTCACGTTACTATTTTTCAGGTAATAGTGTGTATTTTTTCGGTTAACTAG 384 0.4635 MMNMDDDLAGEFDSVFVCVLLMFHLFGLGMVVYTQLKRGSAMVSMGRFELEAFLKAIEKHRVTNMWSLPPIMLAQAKQSVVSKYDLSSLKYIGLSVAPLVKELMEECARRLPHVTIFQVIVCIFSVN. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02978 127 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 114 - -
Seca8g02978 127 Gene3D - 1 119 - -
Seca8g02978 127 Pfam AMP-binding enzyme 11 116 IPR000873 -
Seca8g02978 127 SUPERFAMILY Acetyl-CoA synthetase-like 11 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02978 Seca-Chr8 83074739 83083279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02978 1 118 Monolignol Biosynthesis Gene Families AT4G05160 60.169 3.80e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02978 K01904 - gmx:100808944 159.073