Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g02970 | ATGTTTGTGGTGATTCACAGGCTTGTGACAAATTTTGATGAGGTCTCTTTTCACTTTATTGATTGCATACATAACCACCTCCGCTCCAAAGTAAAGATGGAAGGAAACACTTCCTTGCATCCTCCTCCTTCAGACTCATCTTTGAACACTCCTGTCAGAAGTGCATCACACGGATCTCAGGCACCATCATCAAATCCTGGATATGCACAATATAGCGTGGATGGACTCAAGGATTGTGATAAATTGGTTATTGACTATCTGAAGCAGCATTCAGACATGTCAGATGAACGGGGAATACATGTTAATGAACTATCTCGAGAACTCAAGCTTCCATTGGACAAGATCATGTTGTCACTGAAGACTCTTGGAGATGATGGTTTGGTATACTCCACCATAGATGATTTCCATTACAAACAAGCTTGA | 423 | 0.4113 | MFVVIHRLVTNFDEVSFHFIDCIHNHLRSKVKMEGNTSLHPPPSDSSLNTPVRSASHGSQAPSSNPGYAQYSVDGLKDCDKLVIDYLKQHSDMSDERGIHVNELSRELKLPLDKIMLSLKTLGDDGLVYSTIDDFHYKQA. | 141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g02970 | 140 | Pfam | Replication protein A C terminal | 52 | 134 | IPR014892 | - | |
Seca8g02970 | 140 | MobiDBLite | consensus disorder prediction | 39 | 69 | - | - | |
Seca8g02970 | 140 | FunFam | Replication protein A 32 kDa subunit | 71 | 140 | - | - | |
Seca8g02970 | 140 | Gene3D | - | 70 | 140 | IPR036388 | - | |
Seca8g02970 | 140 | PANTHER | REPLICATION PROTEIN A-RELATED | 7 | 138 | IPR040260 | - | |
Seca8g02970 | 140 | MobiDBLite | consensus disorder prediction | 34 | 69 | - | - | |
Seca8g02970 | 140 | SUPERFAMILY | "Winged helix" DNA-binding domain | 74 | 138 | IPR036390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g02970 | Seca-Chr8 | 82613882 | 82615182 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g02970 | 1 | 138 | Core DNA Replication Machinery Family | AT2G24490 | 34.266 | 2.15e-24 | 93.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g02970 | K10739 | - | gmx:100802512 | 203.371 |