Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02969 ATGTTCTCCAGCACCCAATTTGATGCCTCCTCCGCCTTCTCTGGCGGCGGATTCATGGCTTCGCAGCCCAACGATTCTTCCCCGGCACCTGCTAAACTGTTCAAGAGCCGCGAAACTCACGGTTTGGTACCGGTGACAGTGAAACAGATAAGTGAAGCTTCTCAGTCCGGTGATGAAAAATCGAGTTTTGTGATCAACGGTGTAGATCTGACCAATGTAACTTTGGTTGGAATGGTGTTCGAGAAAACTGAGAGGAACACCGATGTTAATTTTGTTATAGATGATGGAACAGGACGAATCAAATGTCGAAGATGGGTCAATGAGACTTTTGACACAAAGGAAATGGAAGAAATAATGAATGGCATGTATGTTCGTGTTTATGGGCATTTGAAAACCTTTCAAGGTGTAAAGCAACTTGTTGCCTTCTCTGTCAGGCATGTGTGCTAA 447 0.4474 MFSSTQFDASSAFSGGGFMASQPNDSSPAPAKLFKSRETHGLVPVTVKQISEASQSGDEKSSFVINGVDLTNVTLVGMVFEKTERNTDVNFVIDDGTGRIKCRRWVNETFDTKEMEEIMNGMYVRVYGHLKTFQGVKQLVAFSVRHVC. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02969 148 FunFam replication protein A 32 kDa subunit A-like 35 148 - -
Seca8g02969 148 Pfam OB-fold nucleic acid binding domain 73 144 IPR004365 GO:0003676
Seca8g02969 148 SUPERFAMILY Nucleic acid-binding proteins 42 147 IPR012340 -
Seca8g02969 148 CDD RPA2_DBD_D 72 147 - -
Seca8g02969 148 Gene3D - 35 148 IPR012340 -
Seca8g02969 148 PANTHER REPLICATION PROTEIN A-RELATED 6 147 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02969 Seca-Chr8 82610479 82611704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02969 1 147 Core DNA Replication Machinery Family AT2G24490 59.459 2.68e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02969 K10739 - gmx:100802512 246.899