Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02943 ATGCACAGACGAATTCCTCAGATCGATCCAATTAAGAAAACTTATACTACTCATAGTGAATGCCCTGTTGAATTTGAGGTGGATGGACCATACAAGGTACAGACAGGGAACATATGTGTGCATCATATGATTGGAGCTGCAAACCAGAAAAATTTCAATGGAAAAGCATACAGAAGATCTGATGCAAACTTGAGTTTGTCACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGAAAGGAAGGTCAAAATACCTGCACCAGTATGGGAGATGGCTGCATATGCTGCTGCTGCAATTCAAAGACAGAGAGTCAGCAAGGCTTTATTCTGTGCTGCTGGGAATTCCTTGCAAACAGGTGGATCTGAAGATGATGTGGTCATTATAGTCACCTCCGGAAACTTGCATGTCCTGAGCTCTTGGAATTGGAATCACCAAGCAACCTTGCTCCAGAAAAGGAAGATTGAGAATCGTTGTGTGAACATGATAGCACGTTTGTTTAATGCTGAAATTGTAGAAAATGAGACTGCAATTGGAGCAGGAACCGTTGGATCATCTGAAGCCATAATGCTGGCAGGCCTTGCTTTCAAGAAGAAGTGGCAGAACAAGCGCAAGGCTGAGGGCAAGCCCTATGATAAGCCCAACATGGTCACTGGTGCCAATGTGCAGGTGAATTGA 678 0.4366 MHRRIPQIDPIKKTYTTHSECPVEFEVDGPYKVQTGNICVHHMIGAANQKNFNGKAYRRSDANLSLSPINHKKVHSFAEERKVKIPAPVWEMAAYAAAAIQRQRVSKALFCAAGNSLQTGGSEDDVVIIVTSGNLHVLSSWNWNHQATLLQKRKIENRCVNMIARLFNAEIVENETAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVN. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02943 225 SUPERFAMILY PLP-dependent transferases 141 224 IPR015424 -
Seca8g02943 225 Gene3D - 135 224 IPR015421 GO:0003824
Seca8g02943 225 PANTHER GLUTAMATE DECARBOXYLASE 153 224 IPR010107 GO:0004351|GO:0006536|GO:0030170
Seca8g02943 225 Pfam Pyridoxal-dependent decarboxylase conserved domain 154 224 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca8g02943 225 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02943 Seca-Chr8 81778041 81781639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02943 154 224 Calmodulin-binding Proteins AT5G17330 81.690 1.31e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02943 K01580 - gmx:100812201 129.798