Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02934 ATGGCTGGTTCTAGTTCTGTTTCTGGTAACAGTGATAGTAGAATTGAGAATTTGATTTGTGCTAGGAAGTCATTGAAACTTAGCCTAGAAAAATCAAAGTCTGTGGGGTTAGCATTAGAGAAAGCAGGGCCAAGATTGGAAGAGATTAGGCAAAGGTTGCCTTCACTAGAATCAGCTGTTCGGCCAATTCGGGCTGAGAAGGATGCCCTTGTGGCCGTTGGCGGTCACATTAACCGGGCAGTTGGCCCTGCCGCCGCCGTGCTGAAGGTTTTCGACGCGGTTCATGGACTTGAGAAGTCTCTCTTGTCGGATCCGCGAAATGATCTCCCTGGCTACCTGTCTGTGTTGAAGCGCCTGGAGGAGGCACTGAGGTTCTTGGGAGACAACTGTGGATTGGCTATTCAGTGGTTGGATGATATAGTTGAGTACTTGGAAGATAACTCCATTGCTGATCAGGTGTTTCTCTCGAATTTGAAGAAGGAGTTGGAGAGTCTCCGGGGATCGCAGAATGGGGAGCTGGATGGTGGACTCTTGGATGCTGCATTGGATAAATTGGGGAATGAGTTCCGGCTGCTCTTGACTGAAAACAGTGTGCCACTACCAATGTCTTCCCTTGGTGATCAAGCCTGCATTGCCCCTTCGCCGTTGCCTGTGTCTGTTATTCACAAGTTGCAGGCTATTCTTGGTAGGTTGATGGCTAATGATAGACTTGACAAGTGCGTATCGATTTATGTTGAGGTCCGTAGTTCTAATGTGAGAGCGAGTTTGCAGGCTCTTAATTTGGATTACCTTGAGATATCAGTGTCTGAATTTAATGATGTGCAGAGCATAGAGGGGTATATTGCTCAGTGGGGAAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTACAAGCTTTGTAATGATGTGTTTGAGAGGATTGGGCTGGATGTGTGGATGGGTTGCTTTTCAAAGATAGCTGCACAGGCTGGTATACTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGTAAGAAAGACCCCATTAAACTGTTGAAGTTGTTGGATATTTTTGCATCTTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTTGGGGGAGCACCGTGTGCTGAAATCCAGAATTTGACAAGGGATCTTATCAAGAGAGTGATTGATGGGGCAGCAGAGATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGGCAGAACCCACCTCCATCAGATGGAAATGTCCCAAGATTGGTGAGCTTTATCACTGATTACTGCAACAAACTCCTTGGGGAGGACTATAAGCCTATTCTGACCCAAGTCCTGATCATTCACAGAAGTTGGAAGCGTCAAAGCTTTCAGGAGAAACTCCTTGTTAATGAGGTTTTGAACATAATAAAAGCTGTTGAGTTAAATTTGGAGACGTGGATCAAGGCTTATGATGATCCTATGCTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTACAAGCATTTGAAAGGGACAAAGCTAGGGGATCTCTTGGGAGATTCTTGGTTAAGGGAGCATGAACAATACAAGGACTATTACTCTACAATCTTTTTGCGGGACAGCTGGGGAAAGCTTCCTGGGCATTTGAGCAGGGAAGGGCTGATTCTTTTCTCAGGAGGGCGCGCCACCGCACGTGATCTGGTCAAGAAAAGATTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTTTACAAAACAGTCAGGTTGGATCATGCCAGAACGAGATCTGAGAGAGAAGACGTGTCAGCTTATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATGCTAGCTCCTCAAAATATGCAAAATACACAGTGCAGAAGCTGGAGGAAATGCTTTTGTGTCTTTACCGACCAAAACCTGTAAGACATGGCAGCTTGAGAAGCCCACAATTTAGTGGAAAATATGGCAATGGAATACCTGATCTTCGTCGCACAGCCTCTGCTGTTGTGTAA 2031 0.4525 MAGSSSVSGNSDSRIENLICARKSLKLSLEKSKSVGLALEKAGPRLEEIRQRLPSLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSIADQVFLSNLKKELESLRGSQNGELDGGLLDAALDKLGNEFRLLLTENSVPLPMSSLGDQACIAPSPLPVSVIHKLQAILGRLMANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAPCAEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPSDGNVPRLVSFITDYCNKLLGEDYKPILTQVLIIHRSWKRQSFQEKLLVNEVLNIIKAVELNLETWIKAYDDPMLSNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFTKQSGWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSSKYAKYTVQKLEEMLLCLYRPKPVRHGSLRSPQFSGKYGNGIPDLRRTASAVV. 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02934 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 638 IPR004140 GO:0000145|GO:0006887
Seca8g02934 676 Pfam Exo70 exocyst complex subunit 283 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g02934 676 FunFam Exocyst subunit Exo70 family protein 137 648 - -
Seca8g02934 676 Gene3D Exocyst complex component Exo70 85 649 - -
Seca8g02934 676 SUPERFAMILY Cullin repeat-like 87 642 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02934 Seca-Chr8 81573766 81575796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02934 1 676 EXO70 exocyst subunit family AT4G31540 74.964 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02934 K07195 - gmx:100796139 1186.79