Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02931 ATGGCAGTGGAACTCATGGGGTTCCCAAAACTGGACGAACAGAAGGCCATACAAGAGGCGGCATCGGAAGGCCTCAAGGGCATGGAACACCTGATCCGGACCCTCTCCAATCAACCCACTCACTTAAACACTCACCTCACCGATCTCACCGTCTCAAAGTTCAAAAAACTCATCTCCTTACTAAACCGGACCGGTCATGCCCGGTTCAGGCGAGCCCCGGTTCACCCTTCTTCTTCCTCACCCGTCTCAGCCCCGCCGGTTCAGACCGCACCCTCCTCCTCCTCCTCCCTTCCACCGCCGCAACCGCAAACCTCGACCGTCGCCCCTCCGGCGCAGTTCGCTTCTCCGGCGCCGGTCTCCGTCCGCCACGCTCCGGCGAGCTTCGTCCCGGCGCAGCCGCAGAGCATGACGCTCGATTTCACGAAGCCGAACAACAACGTCTTGAGCTCCAACGCTAAATCCATGGAGCTCGAGTTCTCGAAGGAAACAACCACCTTCAGCGTATCCTCCAACTCCTCTTTCATGTCCTCCGCCATCACCGGCGACGGCAGCGTCTCCAACGGCAAGATCTTCCTAACGCCGGCGGTAGCTGCTCCGGCGACCTCCGCTGGAAAGCCTCCTCTTTCGTCGGCGCCGTTCACCAAGAAAAGGTGCCATGACCACCGTGAACACTCCGACGACGTTTCCGGCTCCAGCAAGTGCCATTGCATCAAGAGAAGGAAAAACCGGGTGAAGAAAACGGTGAGAGTGCCGGCGATTAGTTCGAAGATAGCCGATATACCGCCAGACGAGTACTCGTGGCGAAAATACGGTCAGAAACCGATCAAGGGGTCGCCGTACCCACGAGGTTATTACAAGTGCAGCACGGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGTGCACCGGATGATCCAGCGATGCTGATCGTTACGTACGAGGGGGAGCACAGGCACGCGCTTCAGGCCGCGATGCAGGAGAACGCAGCCGGGGTTGTGGGTTTGGTGTTCGAGTCAACGTAG 1023 0.5914 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLIRTLSNQPTHLNTHLTDLTVSKFKKLISLLNRTGHARFRRAPVHPSSSSPVSAPPVQTAPSSSSSLPPPQPQTSTVAPPAQFASPAPVSVRHAPASFVPAQPQSMTLDFTKPNNNVLSSNAKSMELEFSKETTTFSVSSNSSFMSSAITGDGSVSNGKIFLTPAVAAPATSAGKPPLSSAPFTKKRCHDHREHSDDVSGSSKCHCIKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHALQAAMQENAAGVVGLVFEST. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02931 340 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02931 340 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02931 340 Pfam WRKY DNA -binding domain 263 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g02931 340 Pfam Plant zinc cluster domain 215 259 IPR018872 -
Seca8g02931 340 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 326 IPR044810 GO:0003700
Seca8g02931 340 SUPERFAMILY WRKY DNA-binding domain 259 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g02931 340 MobiDBLite consensus disorder prediction 76 91 - -
Seca8g02931 340 Gene3D WRKY domain 249 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g02931 340 MobiDBLite consensus disorder prediction 69 119 - -
Seca8g02931 340 MobiDBLite consensus disorder prediction 92 106 - -
Seca8g02931 340 FunFam WRKY transcription factor 65 245 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02931 Seca-Chr8 81477637 81479885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02931 1 339 WRKY Transcription Factor Family AT2G24570 60.286 7.25e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g02931 WRKY 9.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02931 - - gmx:100127381 486.878