Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02919 ATGTGGTTGCAAAAGAATAATTGGGAAAAGAAGGATGGTGTCAATGGAATAGTGGCAGTTGCAATAGACACAGATAAGGGGAGCCAGAATGCACTTAAATGGGCCATTGACAATCTCCTAACCAAAGGTGCAACTGTAGTTCTCATCCATGTCAGGCATAAGTCAGCTTCATTTTCTGGATCAACCCCAAGGGCAGGGAAAAATGGTATTGGTGAGCAGGGTTCATTGGTATGCAAAGACCCTGATGATCATACCAAAGAAATTTTTCGCCCTTACCGTGTCTTCTGTGCACGAAAAGATATACAATGCAAGGACGTGGTGCTAGAAGATGTAGACATAGCCAAAGGTTTAATTGAATATGTTTCTCAAGCAGCAATTGAGCATTTGGTTATAGGCTCTACAAACAAAACTGGTTTTCTTAGAAGATTCAAGGTAGCTGATGTTCCAGGAACAGTATCAAAAGGGGCACCTGATTTCTGTACAGTATATGTTGTTGGCAAAGGAAAGATTCAAACCATGAGATCTGCTTCTCGTCCTGCTCCTTCCTTTTCCCCTCTGCAAAACCAGTTTAGTCAAGCCAGTACCAGGTCAGATCAATCAGACCCACGTGTGCCTCTGGCTAATAGTGTGAAAGGACCGGAGAGGCGGTCATTTGATGCACCCCGTAGATCACAGGATGGAACAGATTCCTTCAGGTCACCATTGACTAGGAGAGGTGTGCATGACAAGTCATATGGGGAACTTTCCTTGCCAGATACTGACATAACCTTTGTAAGCTCAGGAAGGTCAAGTACAGACCGCTTATTCCCTTCCTATGGTAACCATCAGCTGTACCACTCAGAAACAGGCATATCCAACCCTCGTCTATCATATAGCTCTGATACTGATGGAAACTATAGCTTTGAGTCAATGCATTATGGAAGAAAGTCTATGGATATAGGCTCTCCTGATTTCTCTTCTTTCTCTCACGATAGTGAGGGCTTATCATCTGCTTCTACATCACAAGCCATGGATGATGTGGAGGCTGAGATGAGGAGATTGAAGTTGGAGCTTAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAAAAGGCTGTAGAACTACAGCGTTGGAAATTAGAGGAAGAGAGGAGATTGGAGGAAGCAAGGCTGGCTGAAGAAACCGCATTGGCAATTGCAGAAAAGGAGAAAGCCAAATCAAAGGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAGTTGGAAGCACAGAAGAGAATTAATGCAGAAATGAAAGCACTTAGAGAAGCAGAGGAGAAAAGAAAAGCAGTTGATGCTTTGGCACATAGAGATTTCAGGTATAGAAGGTATGCAATTGAGGAAATTGAAGCTGCAACAAATTTTTTTGCTGAGTCCTTGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTTTAAATGCCATCTGGATCATACACCTGTTGCAGTGAAGGTTCTACGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAACGAGAGGTTGAAATATTGAGCTGCATTAGGCATCCAAACATGGTTCTCCTTTTGGGAGCCTGCCCGGAGTATGGCTGCCTTGTATATGAGCACATGTCAAATGGAAGCTTAGATGACTGCCTCTTTTGTAGAGGAAACACTCCCCCAATTCCATGGCAGCTGAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGCTGTTCCTCCACCAGACAAAACCTGAGCCTCTGGTGCATAGAGACCTGAAACCAGCCAACATCTTGCTTGACCGCAATTATGTGGCTAAGATCAGTGATGTAGGTTTGGCAAGGCTAGTTCCACCATCAGTTGCAGACACTGTGACACAATACCGCATGACAGCAACTGCTGGAACTTTCTGTTACATAGATCCTGAGTACCAGCAGACAGGAATGTTAGGGGTTAAATCTGACATATACTCTCTTGGGGTCATTTTCTTGCAAATATTGACAGGAAGACCACCAATGGGTTTGACACATCATGTTCAAAGATCCATTGAGAAGGGAACATTTGCTGACATGTTGGATCCTAAAGTGCCAGATTGGCCTGTAGAAGAGGCCTTGGTCCTTGCAAAGATGGCAATCAAATGTGCTGAGTTAAGGCGTAAAGACAGACCTGATCTTTGCAAGGAGGTCCTTCCAGAACTAGAGAGGCTAAGAGCACTTGCTGAAAGTAATGATCACTATCCATCATTGAGTGGATACATGAGCCCATCCAATCAGAGCCAAGTTTCTCTTCAGCTGGATGGAGCGAGTTCTCCACTTGCTTATTCTGGGGACAGCTCAAGAAACACATCAAGCCCTGTTTGA 2364 0.4442 MWLQKNNWEKKDGVNGIVAVAIDTDKGSQNALKWAIDNLLTKGATVVLIHVRHKSASFSGSTPRAGKNGIGEQGSLVCKDPDDHTKEIFRPYRVFCARKDIQCKDVVLEDVDIAKGLIEYVSQAAIEHLVIGSTNKTGFLRRFKVADVPGTVSKGAPDFCTVYVVGKGKIQTMRSASRPAPSFSPLQNQFSQASTRSDQSDPRVPLANSVKGPERRSFDAPRRSQDGTDSFRSPLTRRGVHDKSYGELSLPDTDITFVSSGRSSTDRLFPSYGNHQLYHSETGISNPRLSYSSDTDGNYSFESMHYGRKSMDIGSPDFSSFSHDSEGLSSASTSQAMDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARLAEETALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRINAEMKALREAEEKRKAVDALAHRDFRYRRYAIEEIEAATNFFAESLKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAQGRSQFQREVEILSCIRHPNMVLLLGACPEYGCLVYEHMSNGSLDDCLFCRGNTPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGVKSDIYSLGVIFLQILTGRPPMGLTHHVQRSIEKGTFADMLDPKVPDWPVEEALVLAKMAIKCAELRRKDRPDLCKEVLPELERLRALAESNDHYPSLSGYMSPSNQSQVSLQLDGASSPLAYSGDSSRNTSSPV. 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02919 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Seca8g02919 787 MobiDBLite consensus disorder prediction 175 246 - -
Seca8g02919 787 CDD STKc_IRAK 477 737 - -
Seca8g02919 787 Gene3D Phosphorylase Kinase; domain 1 449 543 - -
Seca8g02919 787 ProSiteProfiles Protein kinase domain profile. 471 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02919 787 PANTHER OS02G0152300 PROTEIN 18 757 - -
Seca8g02919 787 MobiDBLite consensus disorder prediction 175 204 - -
Seca8g02919 787 CDD STK_N 17 168 - -
Seca8g02919 787 Coils Coil 330 357 - -
Seca8g02919 787 MobiDBLite consensus disorder prediction 750 787 - -
Seca8g02919 787 Gene3D HUPs 17 165 IPR014729 -
Seca8g02919 787 FunFam U-box domain-containing protein 51 544 744 - -
Seca8g02919 787 Coils Coil 397 443 - -
Seca8g02919 787 Coils Coil 363 383 - -
Seca8g02919 787 SUPERFAMILY Protein kinase-like (PK-like) 454 726 IPR011009 -
Seca8g02919 787 Pfam Universal stress protein family 18 157 IPR006016 -
Seca8g02919 787 Pfam Protein kinase domain 474 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02919 787 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Seca8g02919 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 163 - -
Seca8g02919 787 Gene3D Transferase(Phosphotransferase) domain 1 544 750 - -
Seca8g02919 787 SMART serkin_6 471 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02919 Seca-Chr8 81048358 81055449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02919 1 764 Receptor kinase-like Gene Family AT1G78940 56.072 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Seca8g02919 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02919 - - gmx:100779981 1147.5