Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02914 ATGTTAGAGGAAGATACAAAGCCATTAATTTATCGAGACTTCAAAACTTCTAACATCCTATTGGATTCGGACTACAATGTGAAATTTTCTGATTTTGGGTTGGTGAAAGATGCCCTAGTGGGTGACTTGACTCATGTGTCAACTAGAGTGATGGGAACTCAAGGGTATACAACCCTTAAGTATGTGATGACAGGGCACATGAGTTCGAAGAGTGATGTGTATAGCTTTGGAGTGGTATTGCTTGAGGTAATGACAAGGAGAAAGGCGATGGATAAGAAGAGGCCAGCAGCGGAGCATCACCTGGTGAAATGGGCAAGGCCTCAAATAAAGCATGGAGCAGGAACACAATACCACCAATTGATGGATCCAAAGCTTGATGGCCATTACTCAACCAAAGGAGCACACATGGAAATGAGGTTGGCCTATCTTTGCCTTTCAAGAGATCCCAAATCACGACCACTCATGAGTCAGGTCGTTCAGGGACTATAG 489 0.4397 MLEEDTKPLIYRDFKTSNILLDSDYNVKFSDFGLVKDALVGDLTHVSTRVMGTQGYTTLKYVMTGHMSSKSDVYSFGVVLLEVMTRRKAMDKKRPAAEHHLVKWARPQIKHGAGTQYHQLMDPKLDGHYSTKGAHMEMRLAYLCLSRDPKSRPLMSQVVQGL. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02914 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02914 162 Pfam Protein kinase domain 9 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02914 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Seca8g02914 162 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
Seca8g02914 162 SUPERFAMILY Protein kinase-like (PK-like) 7 160 IPR011009 -
Seca8g02914 162 PANTHER OS01G0588500 PROTEIN-RELATED 5 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02914 Seca-Chr8 80920670 80921256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02914 8 162 Glycoside Hydrolase AT3G07070 49.677 8.39e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca8g02914 Pkinase 2.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02914 - - pda:103709777 217.624