Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02888 ATGACATTTGAGTCTATTGAAAAAGTTAGAGAATTATATAATTCATTTGCTAAGATGGGTTTTGGAGTACGTGTTCGTTCAACTAAACCAAAGAGAGCAGTCTTGGTTTGTTGCAATGAAGGTCAGCACAAAGTGAAAAACTCTGGAAATGAAGAAATTCAAGATGGCACAAGTCAAACTAAGAAAAAGTGTTCAACTACTAGAAGTGGTTGTGAAGCTTCACTTATTGTTTCAAGAGGCACAACACAAAGTAGTTGGATTATACAATCTTTTAACAATAATCATAACCATGTCATGGTTAGCCCCAAGAGTGTGTCTTATATGAGGTGTCACAAAAAGATGACTAAAGCTGCAAAAAGTCTTGTTGAAAAATTTGAGGAAGAAGGCTTACCGACAGGAAAGGTTGCTAAAATTGAATTTAAAGAAATTGGAGGGTTGGGATGGGGAGTAAGTTATTAG 459 0.3551 MTFESIEKVRELYNSFAKMGFGVRVRSTKPKRAVLVCCNEGQHKVKNSGNEEIQDGTSQTKKKCSTTRSGCEASLIVSRGTTQSSWIIQSFNNNHNHVMVSPKSVSYMRCHKKMTKAAKSLVEKFEEEGLPTGKVAKIEFKEIGGLGWGVSY. 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02888 152 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 134 - -
Seca8g02888 152 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02888 Seca-Chr8 79716857 79717315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g02888 FAR1 3.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02888 - - mtr:112420114 213.001