Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g02871 | ATGTCTTGCCACATATTTCCAGCGACACGTCCTACATTAGGCATGTTTGAATCAAAATTTTATGCTTTCAAGGGCAAAATCGACATAGATCAAAAGTTTTGGTCAAAATGGTGTTCCCACTTACCCTCTGAGGTCTATTTTACAGATCTTGTTGGGAACTCTTTCCCAATAGGTATTAGTTCAAAAGGAGATAGTGCTGTCTTTGAAAGAAATGTGAACACAATGGTTAGATTTTATGGGCTGAATAGAAAGCATAGTGGTCTATTTTGCTATAAGGGTGGGAACCAATTCTATATAAGGGTGGGAAATCGTTACGGGGTTGAAATTAAATATCCCCAAAAGCCAAGTGAGGTAGTGGAAATATCTTCAGATGATAGTGAAAGTGACCATGAAGGTCATGTCGATTCTGTTGATGATGGCAGTGATCCTGAGGATTTCCCTTTCTGGATTATGACAATGTCCAAGTCATCTGCTTCAGGGAGGAATGCTTTGCCTATTCCTGCAAAATTTGTCAAAGAGGGGCTTCTGCAAAGTCAGCGGGATTTGACTTTAAGACTTGACAACGGTGAACAGATTCTTTGCAAAATAATTAAAGGTTCTAGGAGGCGGAATGAACGATATCTTGGTAGTGGTTGGTACAAGTTTTGCCGCGACAAAAAATTCAAGGAGGGAGATATGTTGTTGTTTTATTCAAAAGGCAATCCTTACAATTTGTGTGTTAAGATAAAGCGCTCCTAA | 738 | 0.393 | MSCHIFPATRPTLGMFESKFYAFKGKIDIDQKFWSKWCSHLPSEVYFTDLVGNSFPIGISSKGDSAVFERNVNTMVRFYGLNRKHSGLFCYKGGNQFYIRVGNRYGVEIKYPQKPSEVVEISSDDSESDHEGHVDSVDDGSDPEDFPFWIMTMSKSSASGRNALPIPAKFVKEGLLQSQRDLTLRLDNGEQILCKIIKGSRRRNERYLGSGWYKFCRDKKFKEGDMLLFYSKGNPYNLCVKIKRS. | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g02871 | 245 | PANTHER | B3 DOMAIN-CONTAINING | 148 | 242 | - | - | |
Seca8g02871 | 245 | SUPERFAMILY | DNA-binding pseudobarrel domain | 145 | 239 | IPR015300 | - | |
Seca8g02871 | 245 | MobiDBLite | consensus disorder prediction | 120 | 140 | - | - | |
Seca8g02871 | 245 | ProSiteProfiles | B3 DNA-binding domain profile. | 149 | 245 | IPR003340 | GO:0003677 | |
Seca8g02871 | 245 | MobiDBLite | consensus disorder prediction | 120 | 142 | - | - | |
Seca8g02871 | 245 | SMART | B3_2 | 150 | 245 | IPR003340 | GO:0003677 | |
Seca8g02871 | 245 | CDD | B3_DNA | 152 | 244 | IPR003340 | GO:0003677 | |
Seca8g02871 | 245 | Gene3D | - | 136 | 245 | IPR015300 | - | |
Seca8g02871 | 245 | Pfam | B3 DNA binding domain | 151 | 244 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g02871 | Seca-Chr8 | 79237326 | 79238255 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Seca8g02871 | B3 | 4.6e-13 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g02871 | - | K04531 | lja:Lj0g3v0086279.1 | 70.8626 |