Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02857 ATGGCAGATCAAATTGTGTCGCAAGAAGGTGTACCTCCAATTACATATGGTCGTCAAGATGAACAATATGAGCCCCCAAACAATTCAATGTATGCTTTGGAGGATAATAATGAGGACACAGAAGAAGATATAGTAATTGAGTCTCGTATGCCGTTTGAATCCTTTGAAGAGATTAAGAGACTTTACCAGGAGTATGCAATTAGAAAAGGATTTTCTATCCTCACAAGGAATTCGAGAAAAGGAGCTGATGGCAAGCTCATATACTTCAGCTTGGCTTATTCAAAAGAGGGGTCTTACGTGTCCTCCATTTCCACTGATGTGAAATCTGTACCATATACTAAAATGAAGTGTACCACCCACATCACTGCCAATCTTCATAAAGATGGACTATGGCACATCAAAAAATGTGTGCATGAACATTCTCATGAGCTGAGCCCTGGAAAGTCTGCTGTGCGGATCAACAAGAGCTTCCGCTCTCTTGTTTATGACGCAGGAGGATATGATAATGTGCCCTTTATTGAAAGAGACATATACAATTTCATGGGGCAACAAAGACGGACCCTAGGCAAAGACGATGAAGATAGCCAGTTGAGACATGTGTTTTGGGCAGATGCAAGGAGCAAGGCTACATATGAATATTTTGGAGATGTTGTGTCATTTGACACAACCTACCTCACCAATAAATATGACATGCCTTTTGCACCATTTGTTGGGGTTAATCATCATGGGCAATCCATTATACTTGGTTGTGGGTTGCTATCTTCTAAAGAAACATCATCCTTTGTTTGGTTGTTTGAATCATGGCTCCGATGTATGGGTGGGAAGTCTCCAATTGGTATTGTCACTGACCAGTGCAAGGCTATGCAAAAGGCAATTGCCATTGTCTTTCCTAATACTTGA 900 0.41 MADQIVSQEGVPPITYGRQDEQYEPPNNSMYALEDNNEDTEEDIVIESRMPFESFEEIKRLYQEYAIRKGFSILTRNSRKGADGKLIYFSLAYSKEGSYVSSISTDVKSVPYTKMKCTTHITANLHKDGLWHIKKCVHEHSHELSPGKSAVRINKSFRSLVYDAGGYDNVPFIERDIYNFMGQQRRTLGKDDEDSQLRHVFWADARSKATYEYFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSIILGCGLLSSKETSSFVWLFESWLRCMGGKSPIGIVTDQCKAMQKAIAIVFPNT. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02857 299 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 299 IPR031052 GO:0006355
Seca8g02857 299 MobiDBLite consensus disorder prediction 1 31 - -
Seca8g02857 299 Pfam FAR1 DNA-binding domain 61 145 IPR004330 -
Seca8g02857 299 Pfam MULE transposase domain 217 299 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02857 Seca-Chr8 78813657 78814703 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g02857 FAR1 9.2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02857 - - vun:114180824 307.76