Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02843 ATGGTTGTTGCAACTACTACAACTACTCAGACAATTAAGGCGCTAGAAATGTTGAGGAAGATATGGATGGTTTCAAATTTCTTGAACAAGTGGCACTTGATCATGTTGACAGGGTACAGTGATAAGGAGTCTGTGATCAAAAGTATTACATATGGTGCATGTTACTGTTTAATAAAACCAGTTAGAATTGAAGTGTTGCGCAACATATGGCAACATGCAATGAGGAAAATGATTAATAGGAAGCATCAAAATATGGTTGCCAATGATGAGAAAATCTACAATATGACTTCGATTTGGTTTCTTTCTCCTCAATTCTTCTGCTGCATTATTTGTTTGTTGAGAGAAAGAGGCCTTGAAAACAACATTCTTTGTTGTGTAAGTTTTGGAGTTTCTTGCTCTGTGATTTGTGTGATCTCTGATAACTATGTGGTTTCTCTCATATGGGAATTTGATTCCGAATCAAGAAACCGTTTGGAAGGTGAAAAAGATATGGTGGGAGATCATTTTCCAGCGGTGTCGACAGGGTACAATGATAAGGAGTCCATGATCAAAAGTATTACATATGGTGCATGTTACTGTTTAATAAAACCAGTTAGAATTGAAGTGTTGCGCAACATATGGCAACATGCAATGAGGAAAAGGATTAATAGGAAGCATCAAAATATGGTTGCCAATGACGAGAAAATCTACAATATGGCTTCGAAAGATATTCAAAGTATCATCACCTCAGATAACATAACTGACTATAAATATTTGGTAGGTAGAAAAATGAAGAAACAAAATGAACAAAAGGATGACAATAATATAGAGAATGGAGAGGAGAATGAGGAAGCCTCGGCTAGGAAGAAGCCTCATTTAGTTTGGACTGCTGAACTACATAGAAAATTTGTCTGTTTAGTTATTCAACTTGGTCTTGATAGTGAAAAAGATATGGTGGGAGATCATTTTCCAGCGGGTATGCGTGTTCTTGTTGTTGACGGTGACCCTACTTGTCTCAAAGTGTTGGAGAACATAATTCGTAAATGCCAGTATCATGAAATACAGATTGAGTTTAAAAAGGCCATTTCAACAGTCTGGGATTATAGGTTCTGTCAATGGATATGGAGATTTTGA 1113 0.3648 MVVATTTTTQTIKALEMLRKIWMVSNFLNKWHLIMLTGYSDKESVIKSITYGACYCLIKPVRIEVLRNIWQHAMRKMINRKHQNMVANDEKIYNMTSIWFLSPQFFCCIICLLRERGLENNILCCVSFGVSCSVICVISDNYVVSLIWEFDSESRNRLEGEKDMVGDHFPAVSTGYNDKESMIKSITYGACYCLIKPVRIEVLRNIWQHAMRKRINRKHQNMVANDEKIYNMASKDIQSIITSDNITDYKYLVGRKMKKQNEQKDDNNIENGEENEEASARKKPHLVWTAELHRKFVCLVIQLGLDSEKDMVGDHFPAGMRVLVVDGDPTCLKVLENIIRKCQYHEIQIEFKKAISTVWDYRFCQWIWRF. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02843 370 ProSiteProfiles Response regulatory domain profile. 1 74 IPR001789 GO:0000160
Seca8g02843 370 SUPERFAMILY CheY-like 172 225 IPR011006 -
Seca8g02843 370 Gene3D - 7 96 - -
Seca8g02843 370 MobiDBLite consensus disorder prediction 260 280 - -
Seca8g02843 370 SUPERFAMILY CheY-like 15 102 IPR011006 -
Seca8g02843 370 Gene3D - 170 242 - -
Seca8g02843 370 PANTHER TWO-COMPONENT RESPONSE REGULATOR 175 300 IPR045279 GO:0009736
Seca8g02843 370 Gene3D - 279 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02843 Seca-Chr8 77927004 77932872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02843 33 79 Response Regulator Gene Family AT4G16110 53.191 1.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02843 K14491 - gmx:100776075 118.242