Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02836 ATGGCTGCACCACATATAGTTGGCATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATGAAATCAGCCTTGATGATAACATCAACAACTCTTGACAGAGCAGGAAGTCCTATTCCAGCACGGCAATATTCTAAAACAGAAGCTGTGAACATGGTTTCAAATTGCGGACCGCATCACCTGATGCGGCCGCAATATTGCGGTTGCGGCAGTGTCCGCAACCGCATCAGCCCGCAATTGTGTTGTGATTGGAATTCACGACAAAATCCGCATCAGGCCGCAACTCTGTTAAAAATTATTTTTTTTATTCTTTTTCTTTTTTTATTTAGTAGATTTAGAGGAAATTTTGAAGGGTTAGAGAGATTTAAAGATGATAATAGACTAATGGTAAATGAGAAATGCAATTTGGGAGGGGGAATAAGAGATGTAGGCTTATAA 450 0.4089 MAAPHIVGIAALIKQKHPHWSPAAMKSALMITSTTLDRAGSPIPARQYSKTEAVNMVSNCGPHHLMRPQYCGCGSVRNRISPQLCCDWNSRQNPHQAATLLKIIFFILFLFLFSRFRGNFEGLERFKDDNRLMVNEKCNLGGGIRDVGL. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02836 149 Pfam Subtilase family 1 46 IPR000209 GO:0006508|GO:0008236
Seca8g02836 149 SUPERFAMILY Subtilisin-like 1 36 IPR036852 GO:0004252|GO:0006508
Seca8g02836 149 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 53 IPR045051 -
Seca8g02836 149 Gene3D Peptidase S8/S53 domain 1 42 IPR036852 GO:0004252|GO:0006508
Seca8g02836 149 ProSiteProfiles Serine proteases, subtilase domain profile. 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02836 Seca-Chr8 77738575 77739024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02836 1 57 Subtilisin-like Serine Gene Family AT4G30020 73.684 1.75e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02836 - - lja:Lj6g3v1333200.1 98.9821