Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02826 ATGGATCGTTCTGCGACCACTGTTGGACCAGGAATGGATATACCGATCATGCATGACAGTGACAGGTATGAGCTGGTCCGTGATATTGGGTCTGGGAATTTTGGGGTGGCCAGGCTCATGAGAGACAAGCACACTGATGAGCTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTTAGGTTCAAGGAGGTCATACTGACCCCTACACATTTAGCTATTGTCATGGAATATGCTTCTGGCGGAGAGCTATTTGAACGAATATGCAATGCAGGACGGTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCTGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTAGAGAACACATTGCTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCAAAGTCCTCAGTTCTGCATTCACAACCAAAATCTACAGTCGGTACCCCTGCATACATTGCTCCTGAAGTTTTGCTAAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTCGAGGATCCAGAGGAACCTAAAAATTTCCGGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGATTATGTCCATATATCACCGGAGTGCCGTCATCTGATCTCAAGGATCTTTGTTGCAGACCCTGCACAGGTCAGTTTGTTTCTTAATCATTTTATATTCCTGCGAAACTTATGTTCTTTACATATAAGCCTAAGTGAAATGGAATTTTAA 879 0.4243 MDRSATTVGPGMDIPIMHDSDRYELVRDIGSGNFGVARLMRDKHTDELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHISPECRHLISRIFVADPAQVSLFLNHFIFLRNLCSLHISLSEMEF. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02826 292 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Seca8g02826 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Seca8g02826 292 PIRSF ILK 12 281 - -
Seca8g02826 292 FunFam Serine/threonine-protein kinase SRK2E 99 283 - -
Seca8g02826 292 Pfam Protein kinase domain 23 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02826 292 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Seca8g02826 292 PANTHER SERINE/THREONINE KINASE 22 266 - -
Seca8g02826 292 SMART serkin_6 23 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02826 292 ProSiteProfiles Protein kinase domain profile. 23 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g02826 292 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Seca8g02826 292 SUPERFAMILY Protein kinase-like (PK-like) 15 266 IPR011009 -
Seca8g02826 292 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02826 Seca-Chr8 77409930 77414691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02826 22 266 CBL-interacting serine-threonine protein kinases AT5G25110 44.141 3.95e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Seca8g02826 Pkinase 1.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02826 K14498 - gmx:100804702 544.273